| 1 | /*--------------------------------------------------------------------------- |
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| 2 | NeXus - Neutron & X-ray Common Data Format |
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| 3 | |
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| 4 | Application Program Interface Routines |
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| 5 | |
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| 6 | Copyright (C) 1997-2006 Mark Koennecke, Przemek Klosowski |
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| 7 | |
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| 8 | This library is free software; you can redistribute it and/or |
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| 9 | modify it under the terms of the GNU Lesser General Public |
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| 10 | License as published by the Free Software Foundation; either |
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| 11 | version 2 of the License, or (at your option) any later version. |
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| 12 | |
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| 13 | This library is distributed in the hope that it will be useful, |
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| 14 | but WITHOUT ANY WARRANTY; without even the implied warranty of |
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| 15 | MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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| 16 | Lesser General Public License for more details. |
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| 17 | |
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| 18 | You should have received a copy of the GNU Lesser General Public |
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| 19 | License along with this library; if not, write to the Free Software |
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| 20 | Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA |
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| 21 | |
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| 22 | For further information, see <http://www.nexusformat.org> |
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| 23 | |
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| 24 | ----------------------------------------------------------------------------*/ |
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| 25 | |
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| 26 | static const char* rscid = "$Id$"; /* Revision inserted by CVS */ |
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| 27 | |
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| 28 | #include <stdio.h> |
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| 29 | #include <stdlib.h> |
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| 30 | #include <assert.h> |
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| 31 | #include <string.h> |
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| 32 | #include <ctype.h> |
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| 33 | #include <time.h> |
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| 34 | #include <stdarg.h> |
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| 35 | #include <stdint.h> |
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| 36 | |
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| 37 | #include "nxconfig.h" |
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| 38 | #include "napi.h" |
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| 39 | #include "nxstack.h" |
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| 40 | |
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| 41 | /*--------------------------------------------------------------------- |
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| 42 | Recognized and handled napimount URLS |
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| 43 | -----------------------------------------------------------------------*/ |
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| 44 | #define NXBADURL 0 |
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| 45 | #define NXFILE 1 |
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| 46 | |
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| 47 | /*--------------------------------------------------------------------*/ |
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| 48 | static int iFortifyScope; |
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| 49 | /*---------------------------------------------------------------------- |
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| 50 | This is a section with code for searching the NX_LOAD_PATH |
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| 51 | -----------------------------------------------------------------------*/ |
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| 52 | #ifdef _WIN32 |
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| 53 | #define LIBSEP ";" |
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| 54 | #define PATHSEP "\\" |
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| 55 | #define THREAD_LOCAL __declspec(thread) |
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| 56 | #else |
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| 57 | #define LIBSEP ":" |
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| 58 | #define PATHSEP "/" |
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| 59 | #define THREAD_LOCAL __thread |
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| 60 | #endif |
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| 61 | |
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| 62 | #ifdef _MSC_VER |
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| 63 | #define snprintf _snprintf |
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| 64 | #endif /* _MSC_VER */ |
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| 65 | |
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| 66 | #include "nx_stptok.h" |
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| 67 | |
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| 68 | #if defined(_WIN32) |
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| 69 | /* |
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| 70 | * HDF5 on windows does not do locking for multiple threads conveniently so we will implement it ourselves. |
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| 71 | * Freddie Akeroyd, 16/06/2011 |
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| 72 | */ |
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| 73 | #include <windows.h> |
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| 74 | |
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| 75 | |
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| 76 | static CRITICAL_SECTION nx_critical; |
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| 77 | |
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| 78 | static int nxilock() |
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| 79 | { |
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| 80 | static int first_call = 1; |
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| 81 | if (first_call) |
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| 82 | { |
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| 83 | first_call = 0; |
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| 84 | InitializeCriticalSection(&nx_critical); |
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| 85 | } |
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| 86 | EnterCriticalSection(&nx_critical); |
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| 87 | return NX_OK; |
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| 88 | } |
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| 89 | |
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| 90 | static int nxiunlock(int ret) |
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| 91 | { |
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| 92 | LeaveCriticalSection(&nx_critical); |
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| 93 | return ret; |
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| 94 | } |
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| 95 | |
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| 96 | #define LOCKED_CALL(__call) \ |
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| 97 | ( nxilock() , nxiunlock(__call) ) |
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| 98 | |
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| 99 | #elif HAVE_LIBPTHREAD |
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| 100 | |
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| 101 | #include <pthread.h> |
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| 102 | |
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| 103 | static pthread_mutex_t nx_mutex; |
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| 104 | |
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| 105 | #ifdef PTHREAD_MUTEX_RECURSIVE |
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| 106 | #define RECURSIVE_LOCK PTHREAD_MUTEX_RECURSIVE |
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| 107 | #else |
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| 108 | #define RECURSIVE_LOCK PTHREAD_MUTEX_RECURSIVE_NP |
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| 109 | #endif /* PTHREAD_MUTEX_RECURSIVE */ |
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| 110 | |
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| 111 | static void nx_pthread_init() |
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| 112 | { |
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| 113 | pthread_mutexattr_t attr; |
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| 114 | pthread_mutexattr_init(&attr); |
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| 115 | pthread_mutexattr_settype(&attr, RECURSIVE_LOCK); |
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| 116 | pthread_mutex_init(&nx_mutex, &attr); |
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| 117 | } |
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| 118 | |
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| 119 | static int nxilock() |
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| 120 | { |
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| 121 | static pthread_once_t once_control = PTHREAD_ONCE_INIT; |
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| 122 | if (pthread_once(&once_control, nx_pthread_init) != 0) |
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| 123 | { |
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| 124 | NXReportError("pthread_once failed"); |
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| 125 | return NX_ERROR; |
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| 126 | } |
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| 127 | if (pthread_mutex_lock(&nx_mutex) != 0) |
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| 128 | { |
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| 129 | NXReportError("pthread_mutex_lock failed"); |
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| 130 | return NX_ERROR; |
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| 131 | } |
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| 132 | return NX_OK; |
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| 133 | } |
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| 134 | |
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| 135 | static int nxiunlock(int ret) |
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| 136 | { |
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| 137 | if (pthread_mutex_unlock(&nx_mutex) != 0) |
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| 138 | { |
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| 139 | NXReportError("pthread_mutex_unlock failed"); |
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| 140 | return NX_ERROR; |
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| 141 | } |
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| 142 | return ret; |
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| 143 | } |
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| 144 | |
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| 145 | #define LOCKED_CALL(__call) \ |
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| 146 | ( nxilock() , nxiunlock(__call) ) |
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| 147 | |
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| 148 | #else |
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| 149 | |
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| 150 | #define LOCKED_CALL(__call) \ |
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| 151 | __call |
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| 152 | |
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| 153 | #endif /* _WIN32 */ |
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| 154 | |
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| 155 | /** |
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| 156 | * valid NeXus names |
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| 157 | */ |
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| 158 | int validNXName(const char* name, int allow_colon) |
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| 159 | { |
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| 160 | int i; |
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| 161 | if (name == NULL) |
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| 162 | { |
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| 163 | return 0; |
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| 164 | } |
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| 165 | for(i=0; i<strlen(name); ++i) |
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| 166 | { |
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| 167 | if ( (name[i] >= 'a' && name[i] <= 'z') || |
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| 168 | (name[i] >= 'A' && name[i] <= 'Z') || |
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| 169 | (name[i] >= '0' && name[i] <= '9') || |
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| 170 | (name[i] == '_') ) |
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| 171 | { |
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| 172 | ; |
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| 173 | } |
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| 174 | else if (allow_colon && name[i] == ':') |
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| 175 | { |
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| 176 | ; |
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| 177 | } |
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| 178 | else |
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| 179 | { |
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| 180 | return 0; |
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| 181 | } |
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| 182 | } |
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| 183 | return 1; |
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| 184 | } |
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| 185 | |
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| 186 | static int64_t* dupDimsArray(int* dims_array, int rank) |
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| 187 | { |
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| 188 | int i; |
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| 189 | int64_t* dims64 = (int64_t*)malloc(rank * sizeof(int64_t)); |
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| 190 | if (dims64 != NULL) |
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| 191 | { |
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| 192 | for(i=0; i<rank; ++i) |
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| 193 | { |
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| 194 | dims64[i] = dims_array[i]; |
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| 195 | } |
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| 196 | } |
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| 197 | return dims64; |
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| 198 | } |
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| 199 | |
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| 200 | /*--------------------------------------------------------------------- |
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| 201 | wrapper for getenv. This is a future proofing thing for porting to OS |
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| 202 | which have different ways of accessing environment variables |
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| 203 | --------------------------------------------------------------------*/ |
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| 204 | static char *nxgetenv(const char *name){ |
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| 205 | return getenv(name); |
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| 206 | } |
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| 207 | /*----------------------------------------------------------------------*/ |
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| 208 | static int canOpen(char *filename){ |
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| 209 | FILE *fd = NULL; |
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| 210 | |
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| 211 | fd = fopen(filename,"r"); |
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| 212 | if(fd != NULL){ |
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| 213 | fclose(fd); |
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| 214 | return 1; |
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| 215 | } else { |
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| 216 | return 0; |
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| 217 | } |
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| 218 | } |
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| 219 | /*--------------------------------------------------------------------*/ |
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| 220 | static char *locateNexusFileInPath(char *startName){ |
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| 221 | char *loadPath = NULL, *testPath = NULL, *pPtr = NULL; |
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| 222 | char pathPrefix[256]; |
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| 223 | int length; |
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| 224 | |
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| 225 | if(canOpen(startName)){ |
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| 226 | return strdup(startName); |
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| 227 | } |
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| 228 | |
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| 229 | loadPath = nxgetenv("NX_LOAD_PATH"); |
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| 230 | if(loadPath == NULL){ |
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| 231 | /* file not found will be issued by upper level code */ |
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| 232 | return strdup(startName); |
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| 233 | } |
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| 234 | |
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| 235 | pPtr = stptok(loadPath,pathPrefix,255,LIBSEP); |
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| 236 | while(pPtr != NULL){ |
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| 237 | length = strlen(pathPrefix) + strlen(startName) + strlen(PATHSEP) + 2; |
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| 238 | testPath = (char*)malloc(length*sizeof(char)); |
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| 239 | if(testPath == NULL){ |
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| 240 | return strdup(startName); |
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| 241 | } |
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| 242 | memset(testPath,0,length*sizeof(char)); |
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| 243 | strcpy(testPath, pathPrefix); |
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| 244 | strcat(testPath,PATHSEP); |
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| 245 | strcat(testPath,startName); |
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| 246 | if(canOpen(testPath)){ |
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| 247 | return(testPath); |
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| 248 | } |
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| 249 | free(testPath); |
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| 250 | pPtr = stptok(pPtr,pathPrefix,255,LIBSEP); |
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| 251 | } |
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| 252 | return strdup(startName); |
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| 253 | } |
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| 254 | /*------------------------------------------------------------------------ |
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| 255 | HDF-5 cache size special stuff |
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| 256 | -------------------------------------------------------------------------*/ |
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| 257 | long nx_cacheSize = 1024000; /* 1MB, HDF-5 default */ |
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| 258 | |
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| 259 | NXstatus NXsetcache(long newVal) |
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| 260 | { |
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| 261 | if(newVal > 0) |
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| 262 | { |
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| 263 | nx_cacheSize = newVal; |
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| 264 | return NX_OK; |
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| 265 | } |
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| 266 | return NX_ERROR; |
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| 267 | } |
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| 268 | |
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| 269 | /*-----------------------------------------------------------------------*/ |
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| 270 | static NXstatus NXisXML(CONSTCHAR *filename) |
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| 271 | { |
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| 272 | FILE *fd = NULL; |
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| 273 | char line[132]; |
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| 274 | |
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| 275 | fd = fopen(filename,"r"); |
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| 276 | if(fd) { |
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| 277 | int fgets_ok = (fgets(line,131,fd) != NULL); |
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| 278 | fclose(fd); |
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| 279 | if (fgets_ok) { |
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| 280 | if(strstr(line,"?xml") != NULL){ |
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| 281 | return NX_OK; |
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| 282 | } |
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| 283 | } |
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| 284 | else { |
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| 285 | return NX_ERROR; |
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| 286 | } |
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| 287 | } |
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| 288 | return NX_ERROR; |
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| 289 | } |
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| 290 | |
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| 291 | /*-------------------------------------------------------------------------*/ |
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| 292 | static void NXNXNXReportError(void *pData, char *string) |
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| 293 | { |
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| 294 | fprintf(stderr, "%s \n", string); |
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| 295 | } |
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| 296 | /*---------------------------------------------------------------------*/ |
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| 297 | |
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| 298 | static void *NXEHpData = NULL; |
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| 299 | static void (*NXEHIReportError)(void *pData, char *string) = NXNXNXReportError; |
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| 300 | #ifdef HAVE_TLS |
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| 301 | static THREAD_LOCAL void *NXEHpTData = NULL; |
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| 302 | static THREAD_LOCAL void (*NXEHIReportTError)(void *pData, char *string) = NULL; |
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| 303 | #endif |
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| 304 | |
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| 305 | void NXIReportError(void *pData, char *string) { |
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| 306 | fprintf(stderr, "Your application uses NXIReportError, but its first parameter is ignored now - you should use NXReportError."); |
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| 307 | NXReportError(string); |
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| 308 | } |
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| 309 | |
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| 310 | void NXReportError(char *string) { |
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| 311 | #ifdef HAVE_TLS |
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| 312 | if (NXEHIReportTError) { |
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| 313 | (*NXEHIReportTError)(NXEHpTData, string); |
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| 314 | return; |
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| 315 | } |
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| 316 | #endif |
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| 317 | if (NXEHIReportError) { |
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| 318 | (*NXEHIReportError)(NXEHpData, string); |
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| 319 | } |
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| 320 | } |
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| 321 | |
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| 322 | /*---------------------------------------------------------------------*/ |
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| 323 | extern void NXMSetError(void *pData, void (*NewError)(void *pD, char *text)) |
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| 324 | { |
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| 325 | NXEHpData = pData; |
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| 326 | NXEHIReportError = NewError; |
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| 327 | } |
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| 328 | /*----------------------------------------------------------------------*/ |
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| 329 | extern void NXMSetTError(void *pData, void (*NewError)(void *pD, char *text)) |
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| 330 | { |
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| 331 | #ifdef HAVE_TLS |
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| 332 | NXEHpTData = pData; |
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| 333 | NXEHIReportTError = NewError; |
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| 334 | #else |
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| 335 | NXMSetError(pData, NewError); |
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| 336 | #endif |
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| 337 | } |
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| 338 | /*----------------------------------------------------------------------*/ |
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| 339 | extern ErrFunc NXMGetError(){ |
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| 340 | #ifdef HAVE_TLS |
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| 341 | if (NXEHIReportTError) { |
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| 342 | return NXEHIReportTError; |
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| 343 | } |
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| 344 | #endif |
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| 345 | return NXEHIReportError; |
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| 346 | } |
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| 347 | |
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| 348 | /*----------------------------------------------------------------------*/ |
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| 349 | static void NXNXNoReport(void *pData, char *string){ |
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| 350 | /* do nothing */ |
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| 351 | } |
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| 352 | /*----------------------------------------------------------------------*/ |
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| 353 | |
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| 354 | static ErrFunc last_global_errfunc = NXNXNXReportError; |
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| 355 | #ifdef HAVE_TLS |
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| 356 | static THREAD_LOCAL ErrFunc last_thread_errfunc = NULL; |
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| 357 | #endif |
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| 358 | |
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| 359 | extern void NXMDisableErrorReporting() |
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| 360 | { |
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| 361 | #ifdef HAVE_TLS |
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| 362 | if (NXEHIReportTError) { |
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| 363 | last_thread_errfunc = NXEHIReportTError; |
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| 364 | NXEHIReportTError = NXNXNoReport; |
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| 365 | return; |
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| 366 | } |
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| 367 | #endif |
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| 368 | if (NXEHIReportError) { |
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| 369 | last_global_errfunc = NXEHIReportError; |
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| 370 | NXEHIReportError = NXNXNoReport; |
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| 371 | } |
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| 372 | } |
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| 373 | |
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| 374 | extern void NXMEnableErrorReporting() |
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| 375 | { |
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| 376 | #ifdef HAVE_TLS |
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| 377 | if (last_thread_errfunc) { |
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| 378 | NXEHIReportTError = last_thread_errfunc; |
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| 379 | last_thread_errfunc = NULL; |
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| 380 | return; |
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| 381 | } |
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| 382 | #endif |
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| 383 | if (last_global_errfunc) { |
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| 384 | NXEHIReportError = last_global_errfunc; |
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| 385 | last_global_errfunc = NULL; |
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| 386 | } |
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| 387 | } |
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| 388 | |
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| 389 | /*----------------------------------------------------------------------*/ |
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| 390 | #ifdef HDF5 |
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| 391 | #include "napi5.h" |
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| 392 | #endif |
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| 393 | #ifdef HDF4 |
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| 394 | #include "napi4.h" |
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| 395 | #endif |
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| 396 | #ifdef NXXML |
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| 397 | #include "nxxml.h" |
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| 398 | #endif |
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| 399 | /* ---------------------------------------------------------------------- |
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| 400 | |
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| 401 | Definition of NeXus API |
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| 402 | |
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| 403 | ---------------------------------------------------------------------*/ |
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| 404 | static int determineFileTypeImpl(CONSTCHAR *filename) |
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| 405 | { |
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| 406 | FILE *fd = NULL; |
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| 407 | int iRet; |
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| 408 | |
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| 409 | /* |
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| 410 | this is for reading, check for existence first |
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| 411 | */ |
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| 412 | fd = fopen(filename,"r"); |
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| 413 | if(fd == NULL){ |
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| 414 | return -1; |
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| 415 | } |
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| 416 | fclose(fd); |
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| 417 | #ifdef HDF5 |
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| 418 | iRet=H5Fis_hdf5((const char*)filename); |
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| 419 | if( iRet > 0){ |
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| 420 | return 2; |
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| 421 | } |
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| 422 | #endif |
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| 423 | #ifdef HDF4 |
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| 424 | iRet=Hishdf((const char*)filename); |
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| 425 | if( iRet > 0){ |
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| 426 | return 1; |
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| 427 | } |
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| 428 | #endif |
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| 429 | #ifdef NXXML |
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| 430 | iRet = NXisXML(filename); |
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| 431 | if(iRet == NX_OK){ |
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| 432 | return 3; |
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| 433 | } |
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| 434 | #endif |
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| 435 | /* |
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| 436 | file type not recognized |
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| 437 | */ |
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| 438 | return 0; |
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| 439 | } |
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| 440 | |
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| 441 | static int determineFileType(CONSTCHAR *filename) |
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| 442 | { |
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| 443 | return LOCKED_CALL(determineFileTypeImpl(filename)); |
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| 444 | } |
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| 445 | |
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| 446 | /*---------------------------------------------------------------------*/ |
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| 447 | static pNexusFunction handleToNexusFunc(NXhandle fid){ |
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| 448 | pFileStack fileStack = NULL; |
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| 449 | fileStack = (pFileStack)fid; |
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| 450 | if(fileStack != NULL){ |
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| 451 | return peekFileOnStack(fileStack); |
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| 452 | } else { |
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| 453 | return NULL; |
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| 454 | } |
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| 455 | } |
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| 456 | /*--------------------------------------------------------------------*/ |
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| 457 | static NXstatus NXinternalopen(CONSTCHAR *userfilename, NXaccess am, |
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| 458 | pFileStack fileStack); |
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| 459 | /*----------------------------------------------------------------------*/ |
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| 460 | NXstatus NXopen(CONSTCHAR *userfilename, NXaccess am, NXhandle *gHandle){ |
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| 461 | int status; |
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| 462 | pFileStack fileStack = NULL; |
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| 463 | |
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| 464 | *gHandle = NULL; |
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| 465 | fileStack = makeFileStack(); |
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| 466 | if(fileStack == NULL){ |
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| 467 | NXReportError("ERROR: no memory to create filestack"); |
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| 468 | return NX_ERROR; |
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| 469 | } |
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| 470 | status = NXinternalopen(userfilename,am,fileStack); |
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| 471 | if(status == NX_OK){ |
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| 472 | *gHandle = fileStack; |
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| 473 | } |
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| 474 | |
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| 475 | return status; |
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| 476 | } |
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| 477 | /*-----------------------------------------------------------------------*/ |
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| 478 | static NXstatus NXinternalopenImpl(CONSTCHAR *userfilename, NXaccess am, pFileStack fileStack) |
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| 479 | { |
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| 480 | int hdf_type=0; |
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| 481 | int iRet=0; |
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| 482 | NXhandle hdf5_handle = NULL; |
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| 483 | NXhandle hdf4_handle = NULL; |
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| 484 | NXhandle xmlHandle = NULL; |
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| 485 | pNexusFunction fHandle = NULL; |
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| 486 | NXstatus retstat = NX_ERROR; |
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| 487 | char error[1024]; |
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| 488 | char *filename = NULL; |
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| 489 | int my_am = (am & NXACCMASK_REMOVEFLAGS); |
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| 490 | |
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| 491 | /* configure fortify |
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| 492 | iFortifyScope = Fortify_EnterScope(); |
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| 493 | Fortify_CheckAllMemory(); |
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| 494 | */ |
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| 495 | |
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| 496 | /* |
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| 497 | allocate data |
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| 498 | */ |
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| 499 | fHandle = (pNexusFunction)malloc(sizeof(NexusFunction)); |
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| 500 | if (fHandle == NULL) { |
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| 501 | NXReportError("ERROR: no memory to create Function structure"); |
|---|
| 502 | return NX_ERROR; |
|---|
| 503 | } |
|---|
| 504 | memset(fHandle, 0, sizeof(NexusFunction)); /* so any functions we miss are NULL */ |
|---|
| 505 | |
|---|
| 506 | /* |
|---|
| 507 | test the strip flag. Elimnate it for the rest of the tests to work |
|---|
| 508 | */ |
|---|
| 509 | fHandle->stripFlag = 1; |
|---|
| 510 | if(am & NXACC_NOSTRIP){ |
|---|
| 511 | fHandle->stripFlag = 0; |
|---|
| 512 | am = (NXaccess)(am & ~NXACC_NOSTRIP); |
|---|
| 513 | } |
|---|
| 514 | fHandle->checkNameSyntax = 0; |
|---|
| 515 | if (am & NXACC_CHECKNAMESYNTAX) { |
|---|
| 516 | fHandle->checkNameSyntax = 1; |
|---|
| 517 | am = (NXaccess)(am & ~NXACC_CHECKNAMESYNTAX); |
|---|
| 518 | } |
|---|
| 519 | |
|---|
| 520 | |
|---|
| 521 | if (my_am==NXACC_CREATE) { |
|---|
| 522 | /* HDF4 will be used ! */ |
|---|
| 523 | hdf_type=1; |
|---|
| 524 | filename = strdup(userfilename); |
|---|
| 525 | } else if (my_am==NXACC_CREATE4) { |
|---|
| 526 | /* HDF4 will be used ! */ |
|---|
| 527 | hdf_type=1; |
|---|
| 528 | filename = strdup(userfilename); |
|---|
| 529 | } else if (my_am==NXACC_CREATE5) { |
|---|
| 530 | /* HDF5 will be used ! */ |
|---|
| 531 | hdf_type=2; |
|---|
| 532 | filename = strdup(userfilename); |
|---|
| 533 | } else if (my_am==NXACC_CREATEXML) { |
|---|
| 534 | /* XML will be used ! */ |
|---|
| 535 | hdf_type=3; |
|---|
| 536 | filename = strdup(userfilename); |
|---|
| 537 | } else { |
|---|
| 538 | filename = locateNexusFileInPath((char *)userfilename); |
|---|
| 539 | if(filename == NULL){ |
|---|
| 540 | NXReportError("Out of memory in NeXus-API"); |
|---|
| 541 | free(fHandle); |
|---|
| 542 | return NX_ERROR; |
|---|
| 543 | } |
|---|
| 544 | /* check file type hdf4/hdf5/XML for reading */ |
|---|
| 545 | iRet = determineFileType(filename); |
|---|
| 546 | if(iRet < 0) { |
|---|
| 547 | snprintf(error,1023,"failed to open %s for reading", |
|---|
| 548 | filename); |
|---|
| 549 | NXReportError(error); |
|---|
| 550 | free(filename); |
|---|
| 551 | return NX_ERROR; |
|---|
| 552 | } |
|---|
| 553 | if(iRet == 0){ |
|---|
| 554 | snprintf(error,1023,"failed to determine filetype for %s ", |
|---|
| 555 | filename); |
|---|
| 556 | NXReportError(error); |
|---|
| 557 | free(filename); |
|---|
| 558 | free(fHandle); |
|---|
| 559 | return NX_ERROR; |
|---|
| 560 | } |
|---|
| 561 | hdf_type = iRet; |
|---|
| 562 | } |
|---|
| 563 | if(filename == NULL){ |
|---|
| 564 | NXReportError("Out of memory in NeXus-API"); |
|---|
| 565 | return NX_ERROR; |
|---|
| 566 | } |
|---|
| 567 | |
|---|
| 568 | if (hdf_type==1) { |
|---|
| 569 | /* HDF4 type */ |
|---|
| 570 | #ifdef HDF4 |
|---|
| 571 | retstat = NX4open((const char *)filename,am,&hdf4_handle); |
|---|
| 572 | if(retstat != NX_OK){ |
|---|
| 573 | free(fHandle); |
|---|
| 574 | free(filename); |
|---|
| 575 | return retstat; |
|---|
| 576 | } |
|---|
| 577 | fHandle->pNexusData=hdf4_handle; |
|---|
| 578 | NX4assignFunctions(fHandle); |
|---|
| 579 | pushFileStack(fileStack,fHandle,filename); |
|---|
| 580 | #else |
|---|
| 581 | NXReportError( |
|---|
| 582 | "ERROR: Attempt to create HDF4 file when not linked with HDF4"); |
|---|
| 583 | retstat = NX_ERROR; |
|---|
| 584 | #endif /* HDF4 */ |
|---|
| 585 | free(filename); |
|---|
| 586 | return retstat; |
|---|
| 587 | } else if (hdf_type==2) { |
|---|
| 588 | /* HDF5 type */ |
|---|
| 589 | #ifdef HDF5 |
|---|
| 590 | retstat = NX5open(filename,am,&hdf5_handle); |
|---|
| 591 | if(retstat != NX_OK){ |
|---|
| 592 | free(fHandle); |
|---|
| 593 | free(filename); |
|---|
| 594 | return retstat; |
|---|
| 595 | } |
|---|
| 596 | fHandle->pNexusData=hdf5_handle; |
|---|
| 597 | NX5assignFunctions(fHandle); |
|---|
| 598 | pushFileStack(fileStack,fHandle, filename); |
|---|
| 599 | #else |
|---|
| 600 | NXReportError( |
|---|
| 601 | "ERROR: Attempt to create HDF5 file when not linked with HDF5"); |
|---|
| 602 | retstat = NX_ERROR; |
|---|
| 603 | #endif /* HDF5 */ |
|---|
| 604 | free(filename); |
|---|
| 605 | return retstat; |
|---|
| 606 | } else if(hdf_type == 3){ |
|---|
| 607 | /* |
|---|
| 608 | XML type |
|---|
| 609 | */ |
|---|
| 610 | #ifdef NXXML |
|---|
| 611 | retstat = NXXopen(filename,am,&xmlHandle); |
|---|
| 612 | if(retstat != NX_OK){ |
|---|
| 613 | free(fHandle); |
|---|
| 614 | free(filename); |
|---|
| 615 | return retstat; |
|---|
| 616 | } |
|---|
| 617 | fHandle->pNexusData=xmlHandle; |
|---|
| 618 | NXXassignFunctions(fHandle); |
|---|
| 619 | pushFileStack(fileStack,fHandle, filename); |
|---|
| 620 | #else |
|---|
| 621 | NXReportError( |
|---|
| 622 | "ERROR: Attempt to create XML file when not linked with XML"); |
|---|
| 623 | retstat = NX_ERROR; |
|---|
| 624 | #endif |
|---|
| 625 | } else { |
|---|
| 626 | NXReportError( |
|---|
| 627 | "ERROR: Format not readable by this NeXus library"); |
|---|
| 628 | retstat = NX_ERROR; |
|---|
| 629 | } |
|---|
| 630 | if (filename != NULL) { |
|---|
| 631 | free(filename); |
|---|
| 632 | } |
|---|
| 633 | return retstat; |
|---|
| 634 | } |
|---|
| 635 | |
|---|
| 636 | static NXstatus NXinternalopen(CONSTCHAR *userfilename, NXaccess am, pFileStack fileStack) |
|---|
| 637 | { |
|---|
| 638 | return LOCKED_CALL(NXinternalopenImpl(userfilename, am, fileStack)); |
|---|
| 639 | } |
|---|
| 640 | |
|---|
| 641 | |
|---|
| 642 | NXstatus NXreopen(NXhandle pOrigHandle, NXhandle* pNewHandle) |
|---|
| 643 | { |
|---|
| 644 | pFileStack newFileStack; |
|---|
| 645 | pFileStack origFileStack = (pFileStack)pOrigHandle; |
|---|
| 646 | pNexusFunction fOrigHandle = NULL, fNewHandle = NULL; |
|---|
| 647 | *pNewHandle = NULL; |
|---|
| 648 | newFileStack = makeFileStack(); |
|---|
| 649 | if(newFileStack == NULL){ |
|---|
| 650 | NXReportError ("ERROR: no memory to create filestack"); |
|---|
| 651 | return NX_ERROR; |
|---|
| 652 | } |
|---|
| 653 | // The code below will only open the last file on a stack |
|---|
| 654 | // for the moment raise an error, but this behaviour may be OK |
|---|
| 655 | if (fileStackDepth(origFileStack) > 0) |
|---|
| 656 | { |
|---|
| 657 | NXReportError ( |
|---|
| 658 | "ERROR: handle stack referes to many files - cannot reopen"); |
|---|
| 659 | return NX_ERROR; |
|---|
| 660 | } |
|---|
| 661 | fOrigHandle = peekFileOnStack(origFileStack); |
|---|
| 662 | if (fOrigHandle->nxreopen == NULL) |
|---|
| 663 | { |
|---|
| 664 | NXReportError ( |
|---|
| 665 | "ERROR: NXreopen not implemented for this underlying file format"); |
|---|
| 666 | return NX_ERROR; |
|---|
| 667 | } |
|---|
| 668 | fNewHandle = (NexusFunction*)malloc(sizeof(NexusFunction)); |
|---|
| 669 | memcpy(fNewHandle, fOrigHandle, sizeof(NexusFunction)); |
|---|
| 670 | LOCKED_CALL(fNewHandle->nxreopen( fOrigHandle->pNexusData, &(fNewHandle->pNexusData) )); |
|---|
| 671 | pushFileStack( newFileStack, fNewHandle, peekFilenameOnStack(origFileStack) ); |
|---|
| 672 | *pNewHandle = newFileStack; |
|---|
| 673 | return NX_OK; |
|---|
| 674 | } |
|---|
| 675 | |
|---|
| 676 | |
|---|
| 677 | /* ------------------------------------------------------------------------- */ |
|---|
| 678 | |
|---|
| 679 | NXstatus NXclose (NXhandle *fid) |
|---|
| 680 | { |
|---|
| 681 | NXhandle hfil; |
|---|
| 682 | int status; |
|---|
| 683 | pFileStack fileStack = NULL; |
|---|
| 684 | pNexusFunction pFunc=NULL; |
|---|
| 685 | if (*fid == NULL) |
|---|
| 686 | { |
|---|
| 687 | return NX_OK; |
|---|
| 688 | } |
|---|
| 689 | fileStack = (pFileStack)*fid; |
|---|
| 690 | pFunc = peekFileOnStack(fileStack); |
|---|
| 691 | hfil = pFunc->pNexusData; |
|---|
| 692 | status = LOCKED_CALL(pFunc->nxclose(&hfil)); |
|---|
| 693 | pFunc->pNexusData = hfil; |
|---|
| 694 | free(pFunc); |
|---|
| 695 | popFileStack(fileStack); |
|---|
| 696 | if(fileStackDepth(fileStack) < 0){ |
|---|
| 697 | killFileStack(fileStack); |
|---|
| 698 | *fid = NULL; |
|---|
| 699 | } |
|---|
| 700 | /* we can't set fid to NULL always as the handle points to a stack of files for external file support */ |
|---|
| 701 | /* |
|---|
| 702 | Fortify_CheckAllMemory(); |
|---|
| 703 | */ |
|---|
| 704 | |
|---|
| 705 | return status; |
|---|
| 706 | } |
|---|
| 707 | |
|---|
| 708 | /*-----------------------------------------------------------------------*/ |
|---|
| 709 | |
|---|
| 710 | NXstatus NXmakegroup (NXhandle fid, CONSTCHAR *name, CONSTCHAR *nxclass) |
|---|
| 711 | { |
|---|
| 712 | char buffer[256]; |
|---|
| 713 | pNexusFunction pFunc = handleToNexusFunc(fid); |
|---|
| 714 | if ( pFunc->checkNameSyntax && (nxclass != NULL) /* && !strncmp("NX", nxclass, 2) */ && !validNXName(name, 0) ) |
|---|
| 715 | { |
|---|
| 716 | sprintf(buffer, "ERROR: invalid characters in group name \"%s\"", name); |
|---|
| 717 | NXReportError(buffer); |
|---|
| 718 | return NX_ERROR; |
|---|
| 719 | } |
|---|
| 720 | return LOCKED_CALL(pFunc->nxmakegroup(pFunc->pNexusData, name, nxclass)); |
|---|
| 721 | } |
|---|
| 722 | /*------------------------------------------------------------------------*/ |
|---|
| 723 | static int analyzeNapimount(char *napiMount, char *extFile, int extFileLen, |
|---|
| 724 | char *extPath, int extPathLen){ |
|---|
| 725 | char *pPtr = NULL, *path = NULL; |
|---|
| 726 | int length; |
|---|
| 727 | |
|---|
| 728 | memset(extFile,0,extFileLen); |
|---|
| 729 | memset(extPath,0,extPathLen); |
|---|
| 730 | pPtr = strstr(napiMount,"nxfile://"); |
|---|
| 731 | if(pPtr == NULL){ |
|---|
| 732 | return NXBADURL; |
|---|
| 733 | } |
|---|
| 734 | path = strrchr(napiMount,'#'); |
|---|
| 735 | if(path == NULL){ |
|---|
| 736 | length = strlen(napiMount) - 9; |
|---|
| 737 | if(length > extFileLen){ |
|---|
| 738 | NXReportError("ERROR: internal errro with external linking"); |
|---|
| 739 | return NXBADURL; |
|---|
| 740 | } |
|---|
| 741 | memcpy(extFile,pPtr+9,length); |
|---|
| 742 | strcpy(extPath,"/"); |
|---|
| 743 | return NXFILE; |
|---|
| 744 | } else { |
|---|
| 745 | pPtr += 9; |
|---|
| 746 | length = path - pPtr; |
|---|
| 747 | if(length > extFileLen){ |
|---|
| 748 | NXReportError("ERROR: internal errro with external linking"); |
|---|
| 749 | return NXBADURL; |
|---|
| 750 | } |
|---|
| 751 | memcpy(extFile,pPtr,length); |
|---|
| 752 | length = strlen(path-1); |
|---|
| 753 | if(length > extPathLen){ |
|---|
| 754 | NXReportError("ERROR: internal error with external linking"); |
|---|
| 755 | return NXBADURL; |
|---|
| 756 | } |
|---|
| 757 | strcpy(extPath,path+1); |
|---|
| 758 | return NXFILE; |
|---|
| 759 | } |
|---|
| 760 | return NXBADURL; |
|---|
| 761 | } |
|---|
| 762 | /*------------------------------------------------------------------------*/ |
|---|
| 763 | |
|---|
| 764 | NXstatus NXopengroup (NXhandle fid, CONSTCHAR *name, CONSTCHAR *nxclass) |
|---|
| 765 | { |
|---|
| 766 | int status, attStatus, type = NX_CHAR, length = 1023; |
|---|
| 767 | NXaccess access = NXACC_READ; |
|---|
| 768 | NXlink breakID; |
|---|
| 769 | pFileStack fileStack; |
|---|
| 770 | char nxurl[1024], exfile[512], expath[512]; |
|---|
| 771 | pNexusFunction pFunc = NULL; |
|---|
| 772 | |
|---|
| 773 | fileStack = (pFileStack)fid; |
|---|
| 774 | pFunc = handleToNexusFunc(fid); |
|---|
| 775 | |
|---|
| 776 | status = LOCKED_CALL(pFunc->nxopengroup(pFunc->pNexusData, name, nxclass)); |
|---|
| 777 | if(status == NX_OK){ |
|---|
| 778 | pushPath(fileStack,name); |
|---|
| 779 | } |
|---|
| 780 | NXMDisableErrorReporting(); |
|---|
| 781 | attStatus = NXgetattr(fid,"napimount",nxurl,&length, &type); |
|---|
| 782 | NXMEnableErrorReporting(); |
|---|
| 783 | if(attStatus == NX_OK){ |
|---|
| 784 | /* |
|---|
| 785 | this is an external linking group |
|---|
| 786 | */ |
|---|
| 787 | status = analyzeNapimount(nxurl,exfile,511,expath,511); |
|---|
| 788 | if(status == NXBADURL){ |
|---|
| 789 | return NX_ERROR; |
|---|
| 790 | } |
|---|
| 791 | status = NXinternalopen(exfile, access, fileStack); |
|---|
| 792 | if(status == NX_ERROR){ |
|---|
| 793 | return status; |
|---|
| 794 | } |
|---|
| 795 | status = NXopenpath(fid, expath); |
|---|
| 796 | NXgetgroupID(fid,&breakID); |
|---|
| 797 | setCloseID(fileStack,breakID); |
|---|
| 798 | } |
|---|
| 799 | |
|---|
| 800 | return status; |
|---|
| 801 | } |
|---|
| 802 | |
|---|
| 803 | /* ------------------------------------------------------------------- */ |
|---|
| 804 | |
|---|
| 805 | NXstatus NXclosegroup (NXhandle fid) |
|---|
| 806 | { |
|---|
| 807 | int status; |
|---|
| 808 | pFileStack fileStack = NULL; |
|---|
| 809 | NXlink closeID, currentID; |
|---|
| 810 | |
|---|
| 811 | pNexusFunction pFunc = handleToNexusFunc(fid); |
|---|
| 812 | fileStack = (pFileStack)fid; |
|---|
| 813 | if(fileStackDepth(fileStack) == 0){ |
|---|
| 814 | status = LOCKED_CALL(pFunc->nxclosegroup(pFunc->pNexusData)); |
|---|
| 815 | if(status == NX_OK){ |
|---|
| 816 | popPath(fileStack); |
|---|
| 817 | } |
|---|
| 818 | return status; |
|---|
| 819 | } else { |
|---|
| 820 | /* we have to check for leaving an external file */ |
|---|
| 821 | NXgetgroupID(fid,¤tID); |
|---|
| 822 | peekIDOnStack(fileStack,&closeID); |
|---|
| 823 | if(NXsameID(fid,&closeID,¤tID) == NX_OK){ |
|---|
| 824 | NXclose(&fid); |
|---|
| 825 | status = NXclosegroup(fid); |
|---|
| 826 | } else { |
|---|
| 827 | status = LOCKED_CALL(pFunc->nxclosegroup(pFunc->pNexusData)); |
|---|
| 828 | if(status == NX_OK){ |
|---|
| 829 | popPath(fileStack); |
|---|
| 830 | } |
|---|
| 831 | } |
|---|
| 832 | return status; |
|---|
| 833 | } |
|---|
| 834 | } |
|---|
| 835 | |
|---|
| 836 | /* --------------------------------------------------------------------- */ |
|---|
| 837 | |
|---|
| 838 | NXstatus NXmakedata (NXhandle fid, CONSTCHAR *name, int datatype, |
|---|
| 839 | int rank, int dimensions[]) |
|---|
| 840 | { |
|---|
| 841 | int status; |
|---|
| 842 | int64_t* dims64 = dupDimsArray(dimensions, rank); |
|---|
| 843 | status = NXmakedata64(fid, name, datatype, rank, dims64); |
|---|
| 844 | free(dims64); |
|---|
| 845 | return status; |
|---|
| 846 | } |
|---|
| 847 | |
|---|
| 848 | NXstatus NXmakedata64 (NXhandle fid, CONSTCHAR *name, int datatype, |
|---|
| 849 | int rank, int64_t dimensions[]) |
|---|
| 850 | { |
|---|
| 851 | char buffer[256]; |
|---|
| 852 | pNexusFunction pFunc = handleToNexusFunc(fid); |
|---|
| 853 | if ( pFunc->checkNameSyntax && !validNXName(name, 0) ) |
|---|
| 854 | { |
|---|
| 855 | sprintf(buffer, "ERROR: invalid characters in dataset name \"%s\"", name); |
|---|
| 856 | NXReportError(buffer); |
|---|
| 857 | return NX_ERROR; |
|---|
| 858 | } |
|---|
| 859 | return LOCKED_CALL(pFunc->nxmakedata64(pFunc->pNexusData, name, datatype, rank, dimensions)); |
|---|
| 860 | } |
|---|
| 861 | |
|---|
| 862 | /* --------------------------------------------------------------------- */ |
|---|
| 863 | |
|---|
| 864 | NXstatus NXcompmakedata (NXhandle fid, CONSTCHAR *name, int datatype, |
|---|
| 865 | int rank, int dimensions[], int compress_type, int chunk_size[]) |
|---|
| 866 | { |
|---|
| 867 | int status; |
|---|
| 868 | int64_t* dims64 = dupDimsArray(dimensions, rank); |
|---|
| 869 | int64_t* chunk64 = dupDimsArray(chunk_size, rank); |
|---|
| 870 | status = NXcompmakedata64(fid, name, datatype, rank, dims64, compress_type, chunk64); |
|---|
| 871 | free(dims64); |
|---|
| 872 | free(chunk64); |
|---|
| 873 | return status; |
|---|
| 874 | } |
|---|
| 875 | |
|---|
| 876 | NXstatus NXcompmakedata64 (NXhandle fid, CONSTCHAR *name, int datatype, |
|---|
| 877 | int rank, int64_t dimensions[], int compress_type, int64_t chunk_size[]) |
|---|
| 878 | { |
|---|
| 879 | char buffer[256]; |
|---|
| 880 | pNexusFunction pFunc = handleToNexusFunc(fid); |
|---|
| 881 | if ( pFunc->checkNameSyntax && !validNXName(name, 0) ) |
|---|
| 882 | { |
|---|
| 883 | sprintf(buffer, "ERROR: invalid characters in dataset name \"%s\"", name); |
|---|
| 884 | NXReportError(buffer); |
|---|
| 885 | return NX_ERROR; |
|---|
| 886 | } |
|---|
| 887 | return LOCKED_CALL(pFunc->nxcompmakedata64 (pFunc->pNexusData, name, datatype, rank, dimensions, compress_type, chunk_size)); |
|---|
| 888 | } |
|---|
| 889 | |
|---|
| 890 | /* --------------------------------------------------------------------- */ |
|---|
| 891 | |
|---|
| 892 | NXstatus NXcompress (NXhandle fid, int compress_type) |
|---|
| 893 | { |
|---|
| 894 | pNexusFunction pFunc = handleToNexusFunc(fid); |
|---|
| 895 | return LOCKED_CALL(pFunc->nxcompress (pFunc->pNexusData, compress_type)); |
|---|
| 896 | } |
|---|
| 897 | |
|---|
| 898 | |
|---|
| 899 | /* --------------------------------------------------------------------- */ |
|---|
| 900 | |
|---|
| 901 | NXstatus NXopendata (NXhandle fid, CONSTCHAR *name) |
|---|
| 902 | { |
|---|
| 903 | int status, attStatus, type = NX_CHAR, length = 1023; |
|---|
| 904 | NXaccess access = NXACC_READ; |
|---|
| 905 | NXlink breakID; |
|---|
| 906 | pFileStack fileStack; |
|---|
| 907 | char nxurl[1024], exfile[512], expath[512]; |
|---|
| 908 | pNexusFunction pFunc = NULL; |
|---|
| 909 | |
|---|
| 910 | fileStack = (pFileStack)fid; |
|---|
| 911 | pFunc = handleToNexusFunc(fid); |
|---|
| 912 | status = LOCKED_CALL(pFunc->nxopendata(pFunc->pNexusData, name)); |
|---|
| 913 | |
|---|
| 914 | if(status == NX_OK){ |
|---|
| 915 | pushPath(fileStack,name); |
|---|
| 916 | } |
|---|
| 917 | |
|---|
| 918 | NXMDisableErrorReporting(); |
|---|
| 919 | attStatus = NXgetattr(fid,"napimount",nxurl,&length, &type); |
|---|
| 920 | NXMEnableErrorReporting(); |
|---|
| 921 | if(attStatus == NX_OK){ |
|---|
| 922 | /* |
|---|
| 923 | this is an external linking group |
|---|
| 924 | */ |
|---|
| 925 | status = analyzeNapimount(nxurl,exfile,511,expath,511); |
|---|
| 926 | if(status == NXBADURL){ |
|---|
| 927 | return NX_ERROR; |
|---|
| 928 | } |
|---|
| 929 | status = NXinternalopen(exfile, access, fileStack); |
|---|
| 930 | if(status == NX_ERROR){ |
|---|
| 931 | return status; |
|---|
| 932 | } |
|---|
| 933 | status = NXopenpath(fid,expath); |
|---|
| 934 | NXgetdataID(fid,&breakID); |
|---|
| 935 | setCloseID(fileStack,breakID); |
|---|
| 936 | } |
|---|
| 937 | |
|---|
| 938 | return status; |
|---|
| 939 | } |
|---|
| 940 | |
|---|
| 941 | /* ----------------------------------------------------------------- */ |
|---|
| 942 | |
|---|
| 943 | NXstatus NXclosedata (NXhandle fid) |
|---|
| 944 | { |
|---|
| 945 | int status; |
|---|
| 946 | pFileStack fileStack = NULL; |
|---|
| 947 | NXlink closeID, currentID; |
|---|
| 948 | |
|---|
| 949 | pNexusFunction pFunc = handleToNexusFunc(fid); |
|---|
| 950 | fileStack = (pFileStack)fid; |
|---|
| 951 | |
|---|
| 952 | if(fileStackDepth(fileStack) == 0){ |
|---|
| 953 | status = LOCKED_CALL(pFunc->nxclosedata(pFunc->pNexusData)); |
|---|
| 954 | if(status == NX_OK){ |
|---|
| 955 | popPath(fileStack); |
|---|
| 956 | } |
|---|
| 957 | return status; |
|---|
| 958 | } else { |
|---|
| 959 | /* we have to check for leaving an external file */ |
|---|
| 960 | NXgetdataID(fid,¤tID); |
|---|
| 961 | peekIDOnStack(fileStack,&closeID); |
|---|
| 962 | if(NXsameID(fid,&closeID,¤tID) == NX_OK){ |
|---|
| 963 | NXclose(&fid); |
|---|
| 964 | status = NXclosedata(fid); |
|---|
| 965 | } else { |
|---|
| 966 | status = LOCKED_CALL(pFunc->nxclosedata(pFunc->pNexusData)); |
|---|
| 967 | if(status == NX_OK){ |
|---|
| 968 | popPath(fileStack); |
|---|
| 969 | } |
|---|
| 970 | } |
|---|
| 971 | return status; |
|---|
| 972 | } |
|---|
| 973 | } |
|---|
| 974 | |
|---|
| 975 | /* ------------------------------------------------------------------- */ |
|---|
| 976 | |
|---|
| 977 | NXstatus NXputdata (NXhandle fid, const void *data) |
|---|
| 978 | { |
|---|
| 979 | pNexusFunction pFunc = handleToNexusFunc(fid); |
|---|
| 980 | return LOCKED_CALL(pFunc->nxputdata(pFunc->pNexusData, data)); |
|---|
| 981 | } |
|---|
| 982 | |
|---|
| 983 | /* ------------------------------------------------------------------- */ |
|---|
| 984 | |
|---|
| 985 | NXstatus NXputattr (NXhandle fid, CONSTCHAR *name, const void *data, |
|---|
| 986 | int datalen, int iType) |
|---|
| 987 | { |
|---|
| 988 | char buffer[256]; |
|---|
| 989 | pNexusFunction pFunc = handleToNexusFunc(fid); |
|---|
| 990 | if (datalen > 1 && iType != NX_CHAR) |
|---|
| 991 | { |
|---|
| 992 | NXReportError("NXputattr: numeric arrays are not allowed as attributes - only character strings and single numbers"); |
|---|
| 993 | return NX_ERROR; |
|---|
| 994 | } |
|---|
| 995 | if ( pFunc->checkNameSyntax && !validNXName(name, 0) ) |
|---|
| 996 | { |
|---|
| 997 | sprintf(buffer, "ERROR: invalid characters in attribute name \"%s\"", name); |
|---|
| 998 | NXReportError(buffer); |
|---|
| 999 | return NX_ERROR; |
|---|
| 1000 | } |
|---|
| 1001 | return LOCKED_CALL(pFunc->nxputattr(pFunc->pNexusData, name, data, datalen, iType)); |
|---|
| 1002 | } |
|---|
| 1003 | |
|---|
| 1004 | /* ------------------------------------------------------------------- */ |
|---|
| 1005 | |
|---|
| 1006 | NXstatus NXputslab (NXhandle fid, const void *data, const int iStart[], const int iSize[]) |
|---|
| 1007 | { |
|---|
| 1008 | int i, iType, rank; |
|---|
| 1009 | int64_t iStart64[NX_MAXRANK], iSize64[NX_MAXRANK]; |
|---|
| 1010 | if (NXgetinfo64(fid, &rank, iStart64, &iType) != NX_OK) |
|---|
| 1011 | { |
|---|
| 1012 | return NX_ERROR; |
|---|
| 1013 | } |
|---|
| 1014 | for(i=0; i < rank; ++i) |
|---|
| 1015 | { |
|---|
| 1016 | iStart64[i] = iStart[i]; |
|---|
| 1017 | iSize64[i] = iSize[i]; |
|---|
| 1018 | } |
|---|
| 1019 | return NXputslab64(fid, data, iStart64, iSize64); |
|---|
| 1020 | } |
|---|
| 1021 | |
|---|
| 1022 | NXstatus NXputslab64 (NXhandle fid, const void *data, const int64_t iStart[], const int64_t iSize[]) |
|---|
| 1023 | { |
|---|
| 1024 | pNexusFunction pFunc = handleToNexusFunc(fid); |
|---|
| 1025 | return LOCKED_CALL(pFunc->nxputslab64(pFunc->pNexusData, data, iStart, iSize)); |
|---|
| 1026 | } |
|---|
| 1027 | |
|---|
| 1028 | /* ------------------------------------------------------------------- */ |
|---|
| 1029 | |
|---|
| 1030 | NXstatus NXgetdataID (NXhandle fid, NXlink* sRes) |
|---|
| 1031 | { |
|---|
| 1032 | pNexusFunction pFunc = handleToNexusFunc(fid); |
|---|
| 1033 | return LOCKED_CALL(pFunc->nxgetdataID(pFunc->pNexusData, sRes)); |
|---|
| 1034 | } |
|---|
| 1035 | |
|---|
| 1036 | |
|---|
| 1037 | /* ------------------------------------------------------------------- */ |
|---|
| 1038 | |
|---|
| 1039 | NXstatus NXmakelink (NXhandle fid, NXlink* sLink) |
|---|
| 1040 | { |
|---|
| 1041 | pNexusFunction pFunc = handleToNexusFunc(fid); |
|---|
| 1042 | return LOCKED_CALL(pFunc->nxmakelink(pFunc->pNexusData, sLink)); |
|---|
| 1043 | } |
|---|
| 1044 | /* ------------------------------------------------------------------- */ |
|---|
| 1045 | |
|---|
| 1046 | NXstatus NXmakenamedlink (NXhandle fid, CONSTCHAR *newname, NXlink* sLink) |
|---|
| 1047 | { |
|---|
| 1048 | char buffer[256]; |
|---|
| 1049 | pNexusFunction pFunc = handleToNexusFunc(fid); |
|---|
| 1050 | if ( pFunc->checkNameSyntax && !validNXName(newname, 0) ) |
|---|
| 1051 | { |
|---|
| 1052 | sprintf(buffer, "ERROR: invalid characters in link name \"%s\"", newname); |
|---|
| 1053 | NXReportError(buffer); |
|---|
| 1054 | return NX_ERROR; |
|---|
| 1055 | } |
|---|
| 1056 | return LOCKED_CALL(pFunc->nxmakenamedlink(pFunc->pNexusData, newname, sLink)); |
|---|
| 1057 | } |
|---|
| 1058 | /* --------------------------------------------------------------------*/ |
|---|
| 1059 | NXstatus NXopensourcegroup(NXhandle fid) |
|---|
| 1060 | { |
|---|
| 1061 | char target_path[512]; |
|---|
| 1062 | int status, type = NX_CHAR, length = 511; |
|---|
| 1063 | |
|---|
| 1064 | status = NXgetattr(fid,"target",target_path,&length,&type); |
|---|
| 1065 | if(status != NX_OK) |
|---|
| 1066 | { |
|---|
| 1067 | NXReportError("ERROR: item not linked"); |
|---|
| 1068 | return NX_ERROR; |
|---|
| 1069 | } |
|---|
| 1070 | return NXopengrouppath(fid,target_path); |
|---|
| 1071 | } |
|---|
| 1072 | /*----------------------------------------------------------------------*/ |
|---|
| 1073 | |
|---|
| 1074 | NXstatus NXflush(NXhandle *pHandle) |
|---|
| 1075 | { |
|---|
| 1076 | NXhandle hfil; |
|---|
| 1077 | pFileStack fileStack = NULL; |
|---|
| 1078 | int status; |
|---|
| 1079 | |
|---|
| 1080 | pNexusFunction pFunc=NULL; |
|---|
| 1081 | fileStack = (pFileStack)*pHandle; |
|---|
| 1082 | pFunc = peekFileOnStack(fileStack); |
|---|
| 1083 | hfil = pFunc->pNexusData; |
|---|
| 1084 | status = LOCKED_CALL(pFunc->nxflush(&hfil)); |
|---|
| 1085 | pFunc->pNexusData = hfil; |
|---|
| 1086 | return status; |
|---|
| 1087 | } |
|---|
| 1088 | |
|---|
| 1089 | |
|---|
| 1090 | /*-------------------------------------------------------------------------*/ |
|---|
| 1091 | |
|---|
| 1092 | |
|---|
| 1093 | NXstatus NXmalloc (void** data, int rank, |
|---|
| 1094 | const int dimensions[], int datatype) |
|---|
| 1095 | { |
|---|
| 1096 | int status; |
|---|
| 1097 | int64_t* dims64 = dupDimsArray(dimensions, rank); |
|---|
| 1098 | status = NXmalloc64(data, rank, dims64, datatype); |
|---|
| 1099 | free(dims64); |
|---|
| 1100 | return status; |
|---|
| 1101 | } |
|---|
| 1102 | |
|---|
| 1103 | NXstatus NXmalloc64 (void** data, int rank, |
|---|
| 1104 | const int64_t dimensions[], int datatype) |
|---|
| 1105 | { |
|---|
| 1106 | int i; |
|---|
| 1107 | size_t size = 1; |
|---|
| 1108 | *data = NULL; |
|---|
| 1109 | for(i=0; i<rank; i++) |
|---|
| 1110 | { |
|---|
| 1111 | size *= dimensions[i]; |
|---|
| 1112 | } |
|---|
| 1113 | if ((datatype == NX_CHAR) || (datatype == NX_INT8) |
|---|
| 1114 | || (datatype == NX_UINT8)) { |
|---|
| 1115 | /* allow for terminating \0 */ |
|---|
| 1116 | size += 2; |
|---|
| 1117 | } |
|---|
| 1118 | else if ((datatype == NX_INT16) || (datatype == NX_UINT16)) { |
|---|
| 1119 | size *= 2; |
|---|
| 1120 | } |
|---|
| 1121 | else if ((datatype == NX_INT32) || (datatype == NX_UINT32) |
|---|
| 1122 | || (datatype == NX_FLOAT32)) { |
|---|
| 1123 | size *= 4; |
|---|
| 1124 | } |
|---|
| 1125 | else if ((datatype == NX_INT64) || (datatype == NX_UINT64)){ |
|---|
| 1126 | size *= 8; |
|---|
| 1127 | } |
|---|
| 1128 | else if (datatype == NX_FLOAT64) { |
|---|
| 1129 | size *= 8; |
|---|
| 1130 | } |
|---|
| 1131 | else { |
|---|
| 1132 | NXReportError( |
|---|
| 1133 | "ERROR: NXmalloc - unknown data type in array"); |
|---|
| 1134 | return NX_ERROR; |
|---|
| 1135 | } |
|---|
| 1136 | *data = (void*)malloc(size); |
|---|
| 1137 | memset(*data,0,size); |
|---|
| 1138 | return NX_OK; |
|---|
| 1139 | } |
|---|
| 1140 | |
|---|
| 1141 | /*-------------------------------------------------------------------------*/ |
|---|
| 1142 | |
|---|
| 1143 | NXstatus NXfree (void** data) |
|---|
| 1144 | { |
|---|
| 1145 | if (data == NULL) { |
|---|
| 1146 | NXReportError( "ERROR: passing NULL to NXfree"); |
|---|
| 1147 | return NX_ERROR; |
|---|
| 1148 | } |
|---|
| 1149 | if (*data == NULL) { |
|---|
| 1150 | NXReportError("ERROR: passing already freed pointer to NXfree"); |
|---|
| 1151 | return NX_ERROR; |
|---|
| 1152 | } |
|---|
| 1153 | free(*data); |
|---|
| 1154 | *data = NULL; |
|---|
| 1155 | return NX_OK; |
|---|
| 1156 | } |
|---|
| 1157 | |
|---|
| 1158 | /* --------------------------------------------------------------------- */ |
|---|
| 1159 | |
|---|
| 1160 | |
|---|
| 1161 | NXstatus NXgetnextentry (NXhandle fid, NXname name, NXname nxclass, int *datatype) |
|---|
| 1162 | { |
|---|
| 1163 | pNexusFunction pFunc = handleToNexusFunc(fid); |
|---|
| 1164 | return LOCKED_CALL(pFunc->nxgetnextentry(pFunc->pNexusData, name, nxclass, datatype)); |
|---|
| 1165 | } |
|---|
| 1166 | /*----------------------------------------------------------------------*/ |
|---|
| 1167 | /* |
|---|
| 1168 | ** TRIM.C - Remove leading, trailing, & excess embedded spaces |
|---|
| 1169 | ** |
|---|
| 1170 | ** public domain by Bob Stout |
|---|
| 1171 | */ |
|---|
| 1172 | #define NUL '\0' |
|---|
| 1173 | |
|---|
| 1174 | char *nxitrim(char *str) |
|---|
| 1175 | { |
|---|
| 1176 | char *ibuf = str; |
|---|
| 1177 | int i = 0; |
|---|
| 1178 | |
|---|
| 1179 | /* |
|---|
| 1180 | ** Trap NULL |
|---|
| 1181 | */ |
|---|
| 1182 | |
|---|
| 1183 | if (str) |
|---|
| 1184 | { |
|---|
| 1185 | /* |
|---|
| 1186 | ** Remove leading spaces (from RMLEAD.C) |
|---|
| 1187 | */ |
|---|
| 1188 | |
|---|
| 1189 | for (ibuf = str; *ibuf && isspace(*ibuf); ++ibuf) |
|---|
| 1190 | ; |
|---|
| 1191 | str = ibuf; |
|---|
| 1192 | |
|---|
| 1193 | /* |
|---|
| 1194 | ** Remove trailing spaces (from RMTRAIL.C) |
|---|
| 1195 | */ |
|---|
| 1196 | i = strlen(str); |
|---|
| 1197 | while (--i >= 0) |
|---|
| 1198 | { |
|---|
| 1199 | if (!isspace(str[i])) |
|---|
| 1200 | break; |
|---|
| 1201 | } |
|---|
| 1202 | str[++i] = NUL; |
|---|
| 1203 | } |
|---|
| 1204 | return str; |
|---|
| 1205 | } |
|---|
| 1206 | /*-------------------------------------------------------------------------*/ |
|---|
| 1207 | |
|---|
| 1208 | NXstatus NXgetdata (NXhandle fid, void *data) |
|---|
| 1209 | { |
|---|
| 1210 | int status, type, rank; |
|---|
| 1211 | int64_t iDim[NX_MAXRANK]; |
|---|
| 1212 | char *pPtr, *pPtr2; |
|---|
| 1213 | |
|---|
| 1214 | pNexusFunction pFunc = handleToNexusFunc(fid); |
|---|
| 1215 | status = LOCKED_CALL(pFunc->nxgetinfo64(pFunc->pNexusData, &rank, iDim, &type)); /* unstripped size if string */ |
|---|
| 1216 | /* only strip one dimensional strings */ |
|---|
| 1217 | if ( (type == NX_CHAR) && (pFunc->stripFlag == 1) && (rank == 1) ) |
|---|
| 1218 | { |
|---|
| 1219 | pPtr = (char*)malloc(iDim[0]+5); |
|---|
| 1220 | memset(pPtr, 0, iDim[0]+5); |
|---|
| 1221 | status = LOCKED_CALL(pFunc->nxgetdata(pFunc->pNexusData, pPtr)); |
|---|
| 1222 | pPtr2 = nxitrim(pPtr); |
|---|
| 1223 | strncpy((char*)data, pPtr2, strlen(pPtr2)); /* not NULL terminated by default */ |
|---|
| 1224 | free(pPtr); |
|---|
| 1225 | } |
|---|
| 1226 | else |
|---|
| 1227 | { |
|---|
| 1228 | status = LOCKED_CALL(pFunc->nxgetdata(pFunc->pNexusData, data)); |
|---|
| 1229 | } |
|---|
| 1230 | return status; |
|---|
| 1231 | } |
|---|
| 1232 | /*---------------------------------------------------------------------------*/ |
|---|
| 1233 | NXstatus NXgetrawinfo64 (NXhandle fid, int *rank, |
|---|
| 1234 | int64_t dimension[], int *iType) |
|---|
| 1235 | { |
|---|
| 1236 | pNexusFunction pFunc = handleToNexusFunc(fid); |
|---|
| 1237 | return LOCKED_CALL(pFunc->nxgetinfo64(pFunc->pNexusData, rank, dimension, iType)); |
|---|
| 1238 | } |
|---|
| 1239 | |
|---|
| 1240 | NXstatus NXgetrawinfo (NXhandle fid, int *rank, |
|---|
| 1241 | int dimension[], int *iType) |
|---|
| 1242 | { |
|---|
| 1243 | int i, status; |
|---|
| 1244 | int64_t dims64[NX_MAXRANK]; |
|---|
| 1245 | pNexusFunction pFunc = handleToNexusFunc(fid); |
|---|
| 1246 | status = LOCKED_CALL(pFunc->nxgetinfo64(pFunc->pNexusData, rank, dims64, iType)); |
|---|
| 1247 | for(i=0; i < *rank; ++i) |
|---|
| 1248 | { |
|---|
| 1249 | dimension[i] = dims64[i]; |
|---|
| 1250 | } |
|---|
| 1251 | return status; |
|---|
| 1252 | } |
|---|
| 1253 | /*-------------------------------------------------------------------------*/ |
|---|
| 1254 | |
|---|
| 1255 | NXstatus NXgetinfo (NXhandle fid, int *rank, |
|---|
| 1256 | int dimension[], int *iType) |
|---|
| 1257 | { |
|---|
| 1258 | int i, status; |
|---|
| 1259 | int64_t dims64[NX_MAXRANK]; |
|---|
| 1260 | status = NXgetinfo64(fid, rank, dims64, iType); |
|---|
| 1261 | for(i=0; i < *rank; ++i) |
|---|
| 1262 | { |
|---|
| 1263 | dimension[i] = dims64[i]; |
|---|
| 1264 | } |
|---|
| 1265 | return status; |
|---|
| 1266 | } |
|---|
| 1267 | |
|---|
| 1268 | NXstatus NXgetinfo64 (NXhandle fid, int *rank, |
|---|
| 1269 | int64_t dimension[], int *iType) |
|---|
| 1270 | { |
|---|
| 1271 | int status; |
|---|
| 1272 | char *pPtr = NULL; |
|---|
| 1273 | pNexusFunction pFunc = handleToNexusFunc(fid); |
|---|
| 1274 | *rank = 0; |
|---|
| 1275 | status = LOCKED_CALL(pFunc->nxgetinfo64(pFunc->pNexusData, rank, dimension, iType)); |
|---|
| 1276 | /* |
|---|
| 1277 | the length of a string may be trimmed.... |
|---|
| 1278 | */ |
|---|
| 1279 | /* only strip one dimensional strings */ |
|---|
| 1280 | if((*iType == NX_CHAR) && (pFunc->stripFlag == 1) && (*rank == 1)){ |
|---|
| 1281 | pPtr = (char *)malloc((dimension[0]+1)*sizeof(char)); |
|---|
| 1282 | if(pPtr != NULL){ |
|---|
| 1283 | memset(pPtr,0,(dimension[0]+1)*sizeof(char)); |
|---|
| 1284 | LOCKED_CALL(pFunc->nxgetdata(pFunc->pNexusData, pPtr)); |
|---|
| 1285 | dimension[0] = strlen(nxitrim(pPtr)); |
|---|
| 1286 | free(pPtr); |
|---|
| 1287 | } |
|---|
| 1288 | } |
|---|
| 1289 | return status; |
|---|
| 1290 | } |
|---|
| 1291 | |
|---|
| 1292 | /*-------------------------------------------------------------------------*/ |
|---|
| 1293 | |
|---|
| 1294 | NXstatus NXgetslab (NXhandle fid, void *data, |
|---|
| 1295 | const int iStart[], const int iSize[]) |
|---|
| 1296 | { |
|---|
| 1297 | int i, iType, rank; |
|---|
| 1298 | int64_t iStart64[NX_MAXRANK], iSize64[NX_MAXRANK]; |
|---|
| 1299 | if (NXgetinfo64(fid, &rank, iStart64, &iType) != NX_OK) |
|---|
| 1300 | { |
|---|
| 1301 | return NX_ERROR; |
|---|
| 1302 | } |
|---|
| 1303 | for(i=0; i < rank; ++i) |
|---|
| 1304 | { |
|---|
| 1305 | iStart64[i] = iStart[i]; |
|---|
| 1306 | iSize64[i] = iSize[i]; |
|---|
| 1307 | } |
|---|
| 1308 | return NXgetslab64(fid, data, iStart64, iSize64); |
|---|
| 1309 | } |
|---|
| 1310 | |
|---|
| 1311 | NXstatus NXgetslab64 (NXhandle fid, void *data, |
|---|
| 1312 | const int64_t iStart[], const int64_t iSize[]) |
|---|
| 1313 | { |
|---|
| 1314 | pNexusFunction pFunc = handleToNexusFunc(fid); |
|---|
| 1315 | return LOCKED_CALL(pFunc->nxgetslab64(pFunc->pNexusData, data, iStart, iSize)); |
|---|
| 1316 | } |
|---|
| 1317 | |
|---|
| 1318 | /*-------------------------------------------------------------------------*/ |
|---|
| 1319 | |
|---|
| 1320 | NXstatus NXgetnextattr (NXhandle fileid, NXname pName, |
|---|
| 1321 | int *iLength, int *iType) |
|---|
| 1322 | { |
|---|
| 1323 | pNexusFunction pFunc = handleToNexusFunc(fileid); |
|---|
| 1324 | return LOCKED_CALL(pFunc->nxgetnextattr(pFunc->pNexusData, pName, iLength, iType)); |
|---|
| 1325 | } |
|---|
| 1326 | |
|---|
| 1327 | |
|---|
| 1328 | /*-------------------------------------------------------------------------*/ |
|---|
| 1329 | |
|---|
| 1330 | NXstatus NXgetattr (NXhandle fid, char *name, void *data, int* datalen, int* iType) |
|---|
| 1331 | { |
|---|
| 1332 | pNexusFunction pFunc = handleToNexusFunc(fid); |
|---|
| 1333 | return LOCKED_CALL(pFunc->nxgetattr(pFunc->pNexusData, name, data, datalen, iType)); |
|---|
| 1334 | } |
|---|
| 1335 | |
|---|
| 1336 | |
|---|
| 1337 | /*-------------------------------------------------------------------------*/ |
|---|
| 1338 | |
|---|
| 1339 | NXstatus NXgetattrinfo (NXhandle fid, int *iN) |
|---|
| 1340 | { |
|---|
| 1341 | pNexusFunction pFunc = handleToNexusFunc(fid); |
|---|
| 1342 | return LOCKED_CALL(pFunc->nxgetattrinfo(pFunc->pNexusData, iN)); |
|---|
| 1343 | } |
|---|
| 1344 | |
|---|
| 1345 | |
|---|
| 1346 | /*-------------------------------------------------------------------------*/ |
|---|
| 1347 | |
|---|
| 1348 | NXstatus NXgetgroupID (NXhandle fileid, NXlink* sRes) |
|---|
| 1349 | { |
|---|
| 1350 | pNexusFunction pFunc = handleToNexusFunc(fileid); |
|---|
| 1351 | return LOCKED_CALL(pFunc->nxgetgroupID(pFunc->pNexusData, sRes)); |
|---|
| 1352 | } |
|---|
| 1353 | |
|---|
| 1354 | /*-------------------------------------------------------------------------*/ |
|---|
| 1355 | |
|---|
| 1356 | NXstatus NXgetgroupinfo (NXhandle fid, int *iN, NXname pName, NXname pClass) |
|---|
| 1357 | { |
|---|
| 1358 | pNexusFunction pFunc = handleToNexusFunc(fid); |
|---|
| 1359 | return LOCKED_CALL(pFunc->nxgetgroupinfo(pFunc->pNexusData, iN, pName, pClass)); |
|---|
| 1360 | } |
|---|
| 1361 | |
|---|
| 1362 | |
|---|
| 1363 | /*-------------------------------------------------------------------------*/ |
|---|
| 1364 | |
|---|
| 1365 | NXstatus NXsameID (NXhandle fileid, NXlink* pFirstID, NXlink* pSecondID) |
|---|
| 1366 | { |
|---|
| 1367 | pNexusFunction pFunc = handleToNexusFunc(fileid); |
|---|
| 1368 | return LOCKED_CALL(pFunc->nxsameID(pFunc->pNexusData, pFirstID, pSecondID)); |
|---|
| 1369 | } |
|---|
| 1370 | |
|---|
| 1371 | /*-------------------------------------------------------------------------*/ |
|---|
| 1372 | |
|---|
| 1373 | NXstatus NXinitattrdir (NXhandle fid) |
|---|
| 1374 | { |
|---|
| 1375 | pNexusFunction pFunc = handleToNexusFunc(fid); |
|---|
| 1376 | return LOCKED_CALL(pFunc->nxinitattrdir(pFunc->pNexusData)); |
|---|
| 1377 | } |
|---|
| 1378 | /*-------------------------------------------------------------------------*/ |
|---|
| 1379 | |
|---|
| 1380 | NXstatus NXsetnumberformat (NXhandle fid, |
|---|
| 1381 | int type, char *format) |
|---|
| 1382 | { |
|---|
| 1383 | pNexusFunction pFunc = handleToNexusFunc(fid); |
|---|
| 1384 | if(pFunc->nxsetnumberformat != NULL) |
|---|
| 1385 | { |
|---|
| 1386 | return LOCKED_CALL(pFunc->nxsetnumberformat(pFunc->pNexusData,type,format)); |
|---|
| 1387 | } |
|---|
| 1388 | else |
|---|
| 1389 | { |
|---|
| 1390 | /* |
|---|
| 1391 | silently ignore this. Most NeXus file formats do not require |
|---|
| 1392 | this |
|---|
| 1393 | */ |
|---|
| 1394 | return NX_OK; |
|---|
| 1395 | } |
|---|
| 1396 | } |
|---|
| 1397 | |
|---|
| 1398 | |
|---|
| 1399 | /*-------------------------------------------------------------------------*/ |
|---|
| 1400 | |
|---|
| 1401 | NXstatus NXinitgroupdir (NXhandle fid) |
|---|
| 1402 | { |
|---|
| 1403 | pNexusFunction pFunc = handleToNexusFunc(fid); |
|---|
| 1404 | return LOCKED_CALL(pFunc->nxinitgroupdir(pFunc->pNexusData)); |
|---|
| 1405 | } |
|---|
| 1406 | /*----------------------------------------------------------------------*/ |
|---|
| 1407 | NXstatus NXinquirefile(NXhandle handle, char *filename, |
|---|
| 1408 | int filenameBufferLength){ |
|---|
| 1409 | pFileStack fileStack; |
|---|
| 1410 | char *pPtr = NULL; |
|---|
| 1411 | int length, status; |
|---|
| 1412 | |
|---|
| 1413 | pNexusFunction pFunc = handleToNexusFunc(handle); |
|---|
| 1414 | if (pFunc->nxnativeinquirefile != NULL) { |
|---|
| 1415 | |
|---|
| 1416 | status = LOCKED_CALL(pFunc->nxnativeinquirefile(pFunc->pNexusData, filename, filenameBufferLength)); |
|---|
| 1417 | if (status < 0) { |
|---|
| 1418 | return NX_ERROR; |
|---|
| 1419 | } else { |
|---|
| 1420 | return NX_OK; |
|---|
| 1421 | } |
|---|
| 1422 | |
|---|
| 1423 | } |
|---|
| 1424 | |
|---|
| 1425 | fileStack = (pFileStack)handle; |
|---|
| 1426 | pPtr = peekFilenameOnStack(fileStack); |
|---|
| 1427 | if(pPtr != NULL){ |
|---|
| 1428 | length = strlen(pPtr); |
|---|
| 1429 | if(length > filenameBufferLength){ |
|---|
| 1430 | length = filenameBufferLength -1; |
|---|
| 1431 | } |
|---|
| 1432 | memset(filename,0,filenameBufferLength); |
|---|
| 1433 | memcpy(filename,pPtr, length); |
|---|
| 1434 | return NX_OK; |
|---|
| 1435 | } else { |
|---|
| 1436 | return NX_ERROR; |
|---|
| 1437 | } |
|---|
| 1438 | } |
|---|
| 1439 | /*------------------------------------------------------------------------*/ |
|---|
| 1440 | NXstatus NXisexternalgroup(NXhandle fid, CONSTCHAR *name, CONSTCHAR *nxclass, |
|---|
| 1441 | char *url, int urlLen){ |
|---|
| 1442 | int status, attStatus, length = 1023, type = NX_CHAR; |
|---|
| 1443 | char nxurl[1024]; |
|---|
| 1444 | |
|---|
| 1445 | pNexusFunction pFunc = handleToNexusFunc(fid); |
|---|
| 1446 | |
|---|
| 1447 | if (pFunc->nxnativeisexternallink != NULL) { |
|---|
| 1448 | status = LOCKED_CALL(pFunc->nxnativeisexternallink(pFunc->pNexusData, name, url, urlLen)); |
|---|
| 1449 | if (status == NX_OK) { |
|---|
| 1450 | return NX_OK; |
|---|
| 1451 | } |
|---|
| 1452 | // need to continue, could still be old style link |
|---|
| 1453 | } |
|---|
| 1454 | |
|---|
| 1455 | status = LOCKED_CALL(pFunc->nxopengroup(pFunc->pNexusData, name, nxclass)); |
|---|
| 1456 | if(status != NX_OK){ |
|---|
| 1457 | return status; |
|---|
| 1458 | } |
|---|
| 1459 | NXMDisableErrorReporting(); |
|---|
| 1460 | attStatus = NXgetattr(fid,"napimount",nxurl,&length, &type); |
|---|
| 1461 | NXMEnableErrorReporting(); |
|---|
| 1462 | LOCKED_CALL(pFunc->nxclosegroup(pFunc->pNexusData)); |
|---|
| 1463 | if(attStatus == NX_OK){ |
|---|
| 1464 | length = strlen(nxurl); |
|---|
| 1465 | if(length >= urlLen){ |
|---|
| 1466 | length = urlLen - 1; |
|---|
| 1467 | } |
|---|
| 1468 | memset(url,0,urlLen); |
|---|
| 1469 | memcpy(url,nxurl,length); |
|---|
| 1470 | return attStatus; |
|---|
| 1471 | } else { |
|---|
| 1472 | return NX_ERROR; |
|---|
| 1473 | } |
|---|
| 1474 | } |
|---|
| 1475 | /*------------------------------------------------------------------------*/ |
|---|
| 1476 | NXstatus NXisexternaldataset(NXhandle fid, CONSTCHAR *name, |
|---|
| 1477 | char *url, int urlLen){ |
|---|
| 1478 | int status, attStatus, length = 1023, type = NX_CHAR; |
|---|
| 1479 | char nxurl[1024]; |
|---|
| 1480 | |
|---|
| 1481 | pNexusFunction pFunc = handleToNexusFunc(fid); |
|---|
| 1482 | |
|---|
| 1483 | if (pFunc->nxnativeisexternallink != NULL) { |
|---|
| 1484 | status = LOCKED_CALL(pFunc->nxnativeisexternallink(pFunc->pNexusData, name, url, urlLen)); |
|---|
| 1485 | if (status == NX_OK) { |
|---|
| 1486 | return NX_OK; |
|---|
| 1487 | } |
|---|
| 1488 | // need to continue, could still be old style link |
|---|
| 1489 | } |
|---|
| 1490 | |
|---|
| 1491 | status = LOCKED_CALL(pFunc->nxopendata(pFunc->pNexusData, name)); |
|---|
| 1492 | if(status != NX_OK){ |
|---|
| 1493 | return status; |
|---|
| 1494 | } |
|---|
| 1495 | NXMDisableErrorReporting(); |
|---|
| 1496 | attStatus = NXgetattr(fid,"napimount",nxurl,&length, &type); |
|---|
| 1497 | NXMEnableErrorReporting(); |
|---|
| 1498 | LOCKED_CALL(pFunc->nxclosedata(pFunc->pNexusData)); |
|---|
| 1499 | if(attStatus == NX_OK){ |
|---|
| 1500 | length = strlen(nxurl); |
|---|
| 1501 | if(length >= urlLen){ |
|---|
| 1502 | length = urlLen - 1; |
|---|
| 1503 | } |
|---|
| 1504 | memset(url,0,urlLen); |
|---|
| 1505 | memcpy(url,nxurl,length); |
|---|
| 1506 | return attStatus; |
|---|
| 1507 | } else { |
|---|
| 1508 | return NX_ERROR; |
|---|
| 1509 | } |
|---|
| 1510 | } |
|---|
| 1511 | /*------------------------------------------------------------------------*/ |
|---|
| 1512 | NXstatus NXlinkexternal(NXhandle fid, CONSTCHAR *name, CONSTCHAR *nxclass, CONSTCHAR *url) { |
|---|
| 1513 | int status, type = NX_CHAR, length=1024, urllen; |
|---|
| 1514 | char nxurl[1024], exfile[512], expath[512]; |
|---|
| 1515 | pNexusFunction pFunc = handleToNexusFunc(fid); |
|---|
| 1516 | |
|---|
| 1517 | // in HDF5 we support external linking natively |
|---|
| 1518 | if (pFunc->nxnativeexternallink != NULL) { |
|---|
| 1519 | urllen = strlen(url); |
|---|
| 1520 | memset(nxurl, 0, length); |
|---|
| 1521 | if(urllen >= length){ |
|---|
| 1522 | urllen = length - 1; |
|---|
| 1523 | } |
|---|
| 1524 | memcpy(nxurl, url, urllen); |
|---|
| 1525 | status = analyzeNapimount(nxurl,exfile,511,expath,511); |
|---|
| 1526 | if(status != NX_OK){ |
|---|
| 1527 | return status; |
|---|
| 1528 | } |
|---|
| 1529 | status = LOCKED_CALL(pFunc->nxnativeexternallink(pFunc->pNexusData, name, exfile, expath)); |
|---|
| 1530 | if(status != NX_OK){ |
|---|
| 1531 | return status; |
|---|
| 1532 | } |
|---|
| 1533 | return NX_OK; |
|---|
| 1534 | } |
|---|
| 1535 | |
|---|
| 1536 | NXMDisableErrorReporting(); |
|---|
| 1537 | LOCKED_CALL(pFunc->nxmakegroup(pFunc->pNexusData,name,nxclass)); |
|---|
| 1538 | NXMEnableErrorReporting(); |
|---|
| 1539 | |
|---|
| 1540 | status = LOCKED_CALL(pFunc->nxopengroup(pFunc->pNexusData,name,nxclass)); |
|---|
| 1541 | if(status != NX_OK){ |
|---|
| 1542 | return status; |
|---|
| 1543 | } |
|---|
| 1544 | length = strlen(url); |
|---|
| 1545 | status = NXputattr(fid, "napimount",url,length, type); |
|---|
| 1546 | if(status != NX_OK){ |
|---|
| 1547 | return status; |
|---|
| 1548 | } |
|---|
| 1549 | LOCKED_CALL(pFunc->nxclosegroup(pFunc->pNexusData)); |
|---|
| 1550 | return NX_OK; |
|---|
| 1551 | } |
|---|
| 1552 | /*------------------------------------------------------------------------*/ |
|---|
| 1553 | NXstatus NXlinkexternaldataset(NXhandle fid, CONSTCHAR *name, |
|---|
| 1554 | CONSTCHAR *url){ |
|---|
| 1555 | int status, type = NX_CHAR, length=1024, urllen; |
|---|
| 1556 | char nxurl[1024], exfile[512], expath[512]; |
|---|
| 1557 | pNexusFunction pFunc = handleToNexusFunc(fid); |
|---|
| 1558 | int rank = 1; |
|---|
| 1559 | int64_t dims[1] = {1}; |
|---|
| 1560 | |
|---|
| 1561 | //TODO cut and paste |
|---|
| 1562 | |
|---|
| 1563 | // in HDF5 we support external linking natively |
|---|
| 1564 | if (pFunc->nxnativeexternallink != NULL) { |
|---|
| 1565 | urllen = strlen(url); |
|---|
| 1566 | memset(nxurl, 0, length); |
|---|
| 1567 | if(urllen > length){ |
|---|
| 1568 | urllen = length - 1; |
|---|
| 1569 | } |
|---|
| 1570 | memcpy(nxurl, url, urllen); |
|---|
| 1571 | status = analyzeNapimount(nxurl,exfile,511,expath,511); |
|---|
| 1572 | if(status != NX_OK){ |
|---|
| 1573 | return status; |
|---|
| 1574 | } |
|---|
| 1575 | status = LOCKED_CALL(pFunc->nxnativeexternallink(pFunc->pNexusData, name, exfile, expath)); |
|---|
| 1576 | if(status != NX_OK){ |
|---|
| 1577 | return status; |
|---|
| 1578 | } |
|---|
| 1579 | return NX_OK; |
|---|
| 1580 | } |
|---|
| 1581 | |
|---|
| 1582 | |
|---|
| 1583 | status = LOCKED_CALL(pFunc->nxmakedata64(pFunc->pNexusData, name, NX_CHAR, rank, dims)); |
|---|
| 1584 | if(status != NX_OK){ |
|---|
| 1585 | return status; |
|---|
| 1586 | } |
|---|
| 1587 | status = LOCKED_CALL(pFunc->nxopendata(pFunc->pNexusData, name)); |
|---|
| 1588 | if(status != NX_OK){ |
|---|
| 1589 | return status; |
|---|
| 1590 | } |
|---|
| 1591 | length = strlen(url); |
|---|
| 1592 | status = NXputattr(fid, "napimount",url,length, type); |
|---|
| 1593 | if(status != NX_OK){ |
|---|
| 1594 | return status; |
|---|
| 1595 | } |
|---|
| 1596 | LOCKED_CALL(pFunc->nxclosedata(pFunc->pNexusData)); |
|---|
| 1597 | return NX_OK; |
|---|
| 1598 | } |
|---|
| 1599 | /*------------------------------------------------------------------------ |
|---|
| 1600 | Implementation of NXopenpath |
|---|
| 1601 | --------------------------------------------------------------------------*/ |
|---|
| 1602 | static int isDataSetOpen(NXhandle hfil) |
|---|
| 1603 | { |
|---|
| 1604 | NXlink id; |
|---|
| 1605 | |
|---|
| 1606 | /* |
|---|
| 1607 | This uses the (sensible) feauture that NXgetdataID returns NX_ERROR |
|---|
| 1608 | when no dataset is open |
|---|
| 1609 | */ |
|---|
| 1610 | if(NXgetdataID(hfil,&id) == NX_ERROR) |
|---|
| 1611 | { |
|---|
| 1612 | return 0; |
|---|
| 1613 | } |
|---|
| 1614 | else |
|---|
| 1615 | { |
|---|
| 1616 | return 1; |
|---|
| 1617 | } |
|---|
| 1618 | } |
|---|
| 1619 | /*----------------------------------------------------------------------*/ |
|---|
| 1620 | static int isRoot(NXhandle hfil) |
|---|
| 1621 | { |
|---|
| 1622 | NXlink id; |
|---|
| 1623 | |
|---|
| 1624 | /* |
|---|
| 1625 | This uses the feauture that NXgetgroupID returns NX_ERROR |
|---|
| 1626 | when we are at root level |
|---|
| 1627 | */ |
|---|
| 1628 | if(NXgetgroupID(hfil,&id) == NX_ERROR) |
|---|
| 1629 | { |
|---|
| 1630 | return 1; |
|---|
| 1631 | } |
|---|
| 1632 | else |
|---|
| 1633 | { |
|---|
| 1634 | return 0; |
|---|
| 1635 | } |
|---|
| 1636 | } |
|---|
| 1637 | /*-------------------------------------------------------------------- |
|---|
| 1638 | copies the next path element into element. |
|---|
| 1639 | returns a pointer into path beyond the extracted path |
|---|
| 1640 | ---------------------------------------------------------------------*/ |
|---|
| 1641 | static char *extractNextPath(char *path, NXname element) |
|---|
| 1642 | { |
|---|
| 1643 | char *pPtr, *pStart; |
|---|
| 1644 | int length; |
|---|
| 1645 | |
|---|
| 1646 | pPtr = path; |
|---|
| 1647 | /* |
|---|
| 1648 | skip over leading / |
|---|
| 1649 | */ |
|---|
| 1650 | if(*pPtr == '/') |
|---|
| 1651 | { |
|---|
| 1652 | pPtr++; |
|---|
| 1653 | } |
|---|
| 1654 | pStart = pPtr; |
|---|
| 1655 | |
|---|
| 1656 | /* |
|---|
| 1657 | find next / |
|---|
| 1658 | */ |
|---|
| 1659 | pPtr = strchr(pStart,'/'); |
|---|
| 1660 | if(pPtr == NULL) |
|---|
| 1661 | { |
|---|
| 1662 | /* |
|---|
| 1663 | this is the last path element |
|---|
| 1664 | */ |
|---|
| 1665 | strcpy(element,pStart); |
|---|
| 1666 | return NULL; |
|---|
| 1667 | } else { |
|---|
| 1668 | length = pPtr - pStart; |
|---|
| 1669 | strncpy(element,pStart,length); |
|---|
| 1670 | element[length] = '\0'; |
|---|
| 1671 | } |
|---|
| 1672 | return pPtr + 1; |
|---|
| 1673 | } |
|---|
| 1674 | /*-------------------------------------------------------------------*/ |
|---|
| 1675 | static NXstatus gotoRoot(NXhandle hfil) |
|---|
| 1676 | { |
|---|
| 1677 | int status; |
|---|
| 1678 | |
|---|
| 1679 | if(isDataSetOpen(hfil)) |
|---|
| 1680 | { |
|---|
| 1681 | status = NXclosedata(hfil); |
|---|
| 1682 | if(status == NX_ERROR) |
|---|
| 1683 | { |
|---|
| 1684 | return status; |
|---|
| 1685 | } |
|---|
| 1686 | } |
|---|
| 1687 | while(!isRoot(hfil)) |
|---|
| 1688 | { |
|---|
| 1689 | status = NXclosegroup(hfil); |
|---|
| 1690 | if(status == NX_ERROR) |
|---|
| 1691 | { |
|---|
| 1692 | return status; |
|---|
| 1693 | } |
|---|
| 1694 | } |
|---|
| 1695 | return NX_OK; |
|---|
| 1696 | } |
|---|
| 1697 | /*--------------------------------------------------------------------*/ |
|---|
| 1698 | static int isRelative(char *path) |
|---|
| 1699 | { |
|---|
| 1700 | if(path[0] == '.' && path[1] == '.') |
|---|
| 1701 | return 1; |
|---|
| 1702 | else |
|---|
| 1703 | return 0; |
|---|
| 1704 | } |
|---|
| 1705 | /*------------------------------------------------------------------*/ |
|---|
| 1706 | static NXstatus moveOneDown(NXhandle hfil) |
|---|
| 1707 | { |
|---|
| 1708 | if(isDataSetOpen(hfil)) |
|---|
| 1709 | { |
|---|
| 1710 | return NXclosedata(hfil); |
|---|
| 1711 | } |
|---|
| 1712 | else |
|---|
| 1713 | { |
|---|
| 1714 | return NXclosegroup(hfil); |
|---|
| 1715 | } |
|---|
| 1716 | } |
|---|
| 1717 | /*------------------------------------------------------------------- |
|---|
| 1718 | returns a pointer to the remaining path string to move up |
|---|
| 1719 | --------------------------------------------------------------------*/ |
|---|
| 1720 | static char *moveDown(NXhandle hfil, char *path, int *code) |
|---|
| 1721 | { |
|---|
| 1722 | int status; |
|---|
| 1723 | char *pPtr; |
|---|
| 1724 | |
|---|
| 1725 | *code = NX_OK; |
|---|
| 1726 | |
|---|
| 1727 | if(path[0] == '/') |
|---|
| 1728 | { |
|---|
| 1729 | *code = gotoRoot(hfil); |
|---|
| 1730 | return path; |
|---|
| 1731 | } |
|---|
| 1732 | else |
|---|
| 1733 | { |
|---|
| 1734 | pPtr = path; |
|---|
| 1735 | while(isRelative(pPtr)) |
|---|
| 1736 | { |
|---|
| 1737 | status = moveOneDown(hfil); |
|---|
| 1738 | if(status == NX_ERROR) |
|---|
| 1739 | { |
|---|
| 1740 | *code = status; |
|---|
| 1741 | return pPtr; |
|---|
| 1742 | } |
|---|
| 1743 | pPtr += 3; |
|---|
| 1744 | } |
|---|
| 1745 | return pPtr; |
|---|
| 1746 | } |
|---|
| 1747 | } |
|---|
| 1748 | /*--------------------------------------------------------------------*/ |
|---|
| 1749 | static NXstatus stepOneUp(NXhandle hfil, char *name) |
|---|
| 1750 | { |
|---|
| 1751 | int datatype; |
|---|
| 1752 | NXname name2, xclass; |
|---|
| 1753 | char pBueffel[256]; |
|---|
| 1754 | |
|---|
| 1755 | /* |
|---|
| 1756 | catch the case when we are there: i.e. no further stepping |
|---|
| 1757 | necessary. This can happen with paths like ../ |
|---|
| 1758 | */ |
|---|
| 1759 | if (strlen(name) < 1) { |
|---|
| 1760 | return NX_OK; |
|---|
| 1761 | } |
|---|
| 1762 | |
|---|
| 1763 | NXinitgroupdir(hfil); |
|---|
| 1764 | |
|---|
| 1765 | while(NXgetnextentry(hfil, name2, xclass, &datatype) != NX_EOD) |
|---|
| 1766 | { |
|---|
| 1767 | if(strcmp(name2,name) == 0) |
|---|
| 1768 | { |
|---|
| 1769 | if(strcmp(xclass,"SDS") == 0) |
|---|
| 1770 | { |
|---|
| 1771 | return NXopendata(hfil,name); |
|---|
| 1772 | } else { |
|---|
| 1773 | return NXopengroup(hfil,name,xclass); |
|---|
| 1774 | } |
|---|
| 1775 | } |
|---|
| 1776 | } |
|---|
| 1777 | snprintf(pBueffel,255,"ERROR: NXopenpath cannot step into %s",name); |
|---|
| 1778 | NXReportError( pBueffel); |
|---|
| 1779 | return NX_ERROR; |
|---|
| 1780 | } |
|---|
| 1781 | /*--------------------------------------------------------------------*/ |
|---|
| 1782 | static NXstatus stepOneGroupUp(NXhandle hfil, char *name) |
|---|
| 1783 | { |
|---|
| 1784 | int datatype; |
|---|
| 1785 | NXname name2, xclass; |
|---|
| 1786 | char pBueffel[256]; |
|---|
| 1787 | |
|---|
| 1788 | /* |
|---|
| 1789 | catch the case when we are there: i.e. no further stepping |
|---|
| 1790 | necessary. This can happen with paths like ../ |
|---|
| 1791 | */ |
|---|
| 1792 | if(strlen(name) < 1) |
|---|
| 1793 | { |
|---|
| 1794 | return NX_OK; |
|---|
| 1795 | } |
|---|
| 1796 | |
|---|
| 1797 | NXinitgroupdir(hfil); |
|---|
| 1798 | while(NXgetnextentry(hfil,name2,xclass,&datatype) != NX_EOD) |
|---|
| 1799 | { |
|---|
| 1800 | |
|---|
| 1801 | if(strcmp(name2,name) == 0) |
|---|
| 1802 | { |
|---|
| 1803 | if(strcmp(xclass,"SDS") == 0) { |
|---|
| 1804 | return NX_EOD; |
|---|
| 1805 | } |
|---|
| 1806 | else |
|---|
| 1807 | { |
|---|
| 1808 | return NXopengroup(hfil,name,xclass); |
|---|
| 1809 | } |
|---|
| 1810 | } |
|---|
| 1811 | } |
|---|
| 1812 | snprintf(pBueffel,255,"ERROR: NXopenpath cannot step into %s",name); |
|---|
| 1813 | NXReportError( pBueffel); |
|---|
| 1814 | return NX_ERROR; |
|---|
| 1815 | } |
|---|
| 1816 | /*---------------------------------------------------------------------*/ |
|---|
| 1817 | NXstatus NXopenpath(NXhandle hfil, CONSTCHAR *path) |
|---|
| 1818 | { |
|---|
| 1819 | int status, run = 1; |
|---|
| 1820 | NXname pathElement; |
|---|
| 1821 | char *pPtr; |
|---|
| 1822 | |
|---|
| 1823 | if(hfil == NULL || path == NULL) |
|---|
| 1824 | { |
|---|
| 1825 | NXReportError( |
|---|
| 1826 | "ERROR: NXopendata needs both a file handle and a path string"); |
|---|
| 1827 | return NX_ERROR; |
|---|
| 1828 | } |
|---|
| 1829 | |
|---|
| 1830 | pPtr = moveDown(hfil,(char *)path,&status); |
|---|
| 1831 | if(status != NX_OK) |
|---|
| 1832 | { |
|---|
| 1833 | NXReportError( |
|---|
| 1834 | "ERROR: NXopendata failed to move down in hierarchy"); |
|---|
| 1835 | return status; |
|---|
| 1836 | } |
|---|
| 1837 | |
|---|
| 1838 | while(run == 1) |
|---|
| 1839 | { |
|---|
| 1840 | pPtr = extractNextPath(pPtr, pathElement); |
|---|
| 1841 | status = stepOneUp(hfil,pathElement); |
|---|
| 1842 | if(status != NX_OK) |
|---|
| 1843 | { |
|---|
| 1844 | return status; |
|---|
| 1845 | } |
|---|
| 1846 | if(pPtr == NULL) |
|---|
| 1847 | { |
|---|
| 1848 | run = 0; |
|---|
| 1849 | } |
|---|
| 1850 | } |
|---|
| 1851 | return NX_OK; |
|---|
| 1852 | } |
|---|
| 1853 | /*---------------------------------------------------------------------*/ |
|---|
| 1854 | NXstatus NXopengrouppath(NXhandle hfil, CONSTCHAR *path) |
|---|
| 1855 | { |
|---|
| 1856 | int status, run = 1; |
|---|
| 1857 | NXname pathElement; |
|---|
| 1858 | char *pPtr; |
|---|
| 1859 | |
|---|
| 1860 | if(hfil == NULL || path == NULL) |
|---|
| 1861 | { |
|---|
| 1862 | NXReportError( |
|---|
| 1863 | "ERROR: NXopendata needs both a file handle and a path string"); |
|---|
| 1864 | return NX_ERROR; |
|---|
| 1865 | } |
|---|
| 1866 | |
|---|
| 1867 | pPtr = moveDown(hfil,(char *)path,&status); |
|---|
| 1868 | if(status != NX_OK) |
|---|
| 1869 | { |
|---|
| 1870 | NXReportError( |
|---|
| 1871 | "ERROR: NXopendata failed to move down in hierarchy"); |
|---|
| 1872 | return status; |
|---|
| 1873 | } |
|---|
| 1874 | |
|---|
| 1875 | while(run == 1) |
|---|
| 1876 | { |
|---|
| 1877 | pPtr = extractNextPath(pPtr, pathElement); |
|---|
| 1878 | status = stepOneGroupUp(hfil,pathElement); |
|---|
| 1879 | if(status == NX_ERROR) |
|---|
| 1880 | { |
|---|
| 1881 | return status; |
|---|
| 1882 | } |
|---|
| 1883 | if(pPtr == NULL || status == NX_EOD) |
|---|
| 1884 | { |
|---|
| 1885 | run = 0; |
|---|
| 1886 | } |
|---|
| 1887 | } |
|---|
| 1888 | return NX_OK; |
|---|
| 1889 | } |
|---|
| 1890 | /*---------------------------------------------------------------------*/ |
|---|
| 1891 | NXstatus NXIprintlink(NXhandle fid, NXlink* link) |
|---|
| 1892 | { |
|---|
| 1893 | pNexusFunction pFunc = handleToNexusFunc(fid); |
|---|
| 1894 | return LOCKED_CALL(pFunc->nxprintlink(pFunc->pNexusData, link)); |
|---|
| 1895 | } |
|---|
| 1896 | /*----------------------------------------------------------------------*/ |
|---|
| 1897 | NXstatus NXgetpath(NXhandle fid, char *path, int pathlen){ |
|---|
| 1898 | int status; |
|---|
| 1899 | pFileStack fileStack = NULL; |
|---|
| 1900 | |
|---|
| 1901 | fileStack = (pFileStack)fid; |
|---|
| 1902 | status = buildPath(fileStack,path,pathlen); |
|---|
| 1903 | if(status != 1){ |
|---|
| 1904 | return NX_ERROR; |
|---|
| 1905 | } |
|---|
| 1906 | return NX_OK; |
|---|
| 1907 | } |
|---|
| 1908 | |
|---|
| 1909 | /*-------------------------------------------------------------------- |
|---|
| 1910 | format NeXus time. Code needed in every NeXus file driver |
|---|
| 1911 | ---------------------------------------------------------------------*/ |
|---|
| 1912 | char *NXIformatNeXusTime(){ |
|---|
| 1913 | time_t timer; |
|---|
| 1914 | char* time_buffer = NULL; |
|---|
| 1915 | struct tm *time_info; |
|---|
| 1916 | const char* time_format; |
|---|
| 1917 | long gmt_offset; |
|---|
| 1918 | #ifdef USE_FTIME |
|---|
| 1919 | struct timeb timeb_struct; |
|---|
| 1920 | #endif |
|---|
| 1921 | |
|---|
| 1922 | time_buffer = (char *)malloc(64*sizeof(char)); |
|---|
| 1923 | if(!time_buffer){ |
|---|
| 1924 | NXReportError("Failed to allocate buffer for time data"); |
|---|
| 1925 | return NULL; |
|---|
| 1926 | } |
|---|
| 1927 | |
|---|
| 1928 | #ifdef NEED_TZSET |
|---|
| 1929 | tzset(); |
|---|
| 1930 | #endif |
|---|
| 1931 | time(&timer); |
|---|
| 1932 | #ifdef USE_FTIME |
|---|
| 1933 | ftime(&timeb_struct); |
|---|
| 1934 | gmt_offset = -timeb_struct.timezone * 60; |
|---|
| 1935 | if (timeb_struct.dstflag != 0) |
|---|
| 1936 | { |
|---|
| 1937 | gmt_offset += 3600; |
|---|
| 1938 | } |
|---|
| 1939 | #else |
|---|
| 1940 | time_info = gmtime(&timer); |
|---|
| 1941 | if (time_info != NULL) |
|---|
| 1942 | { |
|---|
| 1943 | gmt_offset = (long)difftime(timer, mktime(time_info)); |
|---|
| 1944 | } |
|---|
| 1945 | else |
|---|
| 1946 | { |
|---|
| 1947 | NXReportError( |
|---|
| 1948 | "Your gmtime() function does not work ... timezone information will be incorrect\n"); |
|---|
| 1949 | gmt_offset = 0; |
|---|
| 1950 | } |
|---|
| 1951 | #endif |
|---|
| 1952 | time_info = localtime(&timer); |
|---|
| 1953 | if (time_info != NULL) |
|---|
| 1954 | { |
|---|
| 1955 | if (gmt_offset < 0) |
|---|
| 1956 | { |
|---|
| 1957 | time_format = "%04d-%02d-%02dT%02d:%02d:%02d-%02d:%02d"; |
|---|
| 1958 | } |
|---|
| 1959 | else |
|---|
| 1960 | { |
|---|
| 1961 | time_format = "%04d-%02d-%02dT%02d:%02d:%02d+%02d:%02d"; |
|---|
| 1962 | } |
|---|
| 1963 | sprintf(time_buffer, time_format, |
|---|
| 1964 | 1900 + time_info->tm_year, |
|---|
| 1965 | 1 + time_info->tm_mon, |
|---|
| 1966 | time_info->tm_mday, |
|---|
| 1967 | time_info->tm_hour, |
|---|
| 1968 | time_info->tm_min, |
|---|
| 1969 | time_info->tm_sec, |
|---|
| 1970 | abs(gmt_offset / 3600), |
|---|
| 1971 | abs((gmt_offset % 3600) / 60) |
|---|
| 1972 | ); |
|---|
| 1973 | } |
|---|
| 1974 | else |
|---|
| 1975 | { |
|---|
| 1976 | strcpy(time_buffer, "1970-01-01T00:00:00+00:00"); |
|---|
| 1977 | } |
|---|
| 1978 | return time_buffer; |
|---|
| 1979 | } |
|---|
| 1980 | /*---------------------------------------------------------------------- |
|---|
| 1981 | F77 - API - Support - Routines |
|---|
| 1982 | ----------------------------------------------------------------------*/ |
|---|
| 1983 | /* |
|---|
| 1984 | * We store the whole of the NeXus file in the array - that way |
|---|
| 1985 | * we can just pass the array name to C as it will be a valid |
|---|
| 1986 | * NXhandle. We could store the NXhandle value in the FORTRAN array |
|---|
| 1987 | * instead, but that would mean writing far more wrappers |
|---|
| 1988 | */ |
|---|
| 1989 | NXstatus NXfopen(char * filename, NXaccess* am, |
|---|
| 1990 | NXhandle pHandle) |
|---|
| 1991 | { |
|---|
| 1992 | NXstatus ret; |
|---|
| 1993 | NXhandle fileid = NULL; |
|---|
| 1994 | ret = NXopen(filename, *am, &fileid); |
|---|
| 1995 | if (ret == NX_OK) |
|---|
| 1996 | { |
|---|
| 1997 | memcpy(pHandle, fileid, getFileStackSize()); |
|---|
| 1998 | } |
|---|
| 1999 | else |
|---|
| 2000 | { |
|---|
| 2001 | memset(pHandle, 0, getFileStackSize()); |
|---|
| 2002 | } |
|---|
| 2003 | if (fileid != NULL) |
|---|
| 2004 | { |
|---|
| 2005 | free(fileid); |
|---|
| 2006 | } |
|---|
| 2007 | return ret; |
|---|
| 2008 | } |
|---|
| 2009 | /* |
|---|
| 2010 | * The pHandle from FORTRAN is a pointer to a static FORTRAN |
|---|
| 2011 | * array holding the NexusFunction structure. We need to malloc() |
|---|
| 2012 | * a temporary copy as NXclose will try to free() this |
|---|
| 2013 | */ |
|---|
| 2014 | NXstatus NXfclose (NXhandle pHandle) |
|---|
| 2015 | { |
|---|
| 2016 | NXhandle h; |
|---|
| 2017 | NXstatus ret; |
|---|
| 2018 | h = (NXhandle)malloc(getFileStackSize()); |
|---|
| 2019 | memcpy(h, pHandle, getFileStackSize()); |
|---|
| 2020 | ret = NXclose(&h); /* does free(h) */ |
|---|
| 2021 | memset(pHandle, 0, getFileStackSize()); |
|---|
| 2022 | return ret; |
|---|
| 2023 | } |
|---|
| 2024 | |
|---|
| 2025 | /*---------------------------------------------------------------------*/ |
|---|
| 2026 | NXstatus NXfflush(NXhandle pHandle) |
|---|
| 2027 | { |
|---|
| 2028 | NXhandle h; |
|---|
| 2029 | NXstatus ret; |
|---|
| 2030 | h = (NXhandle)malloc(getFileStackSize()); |
|---|
| 2031 | memcpy(h, pHandle, getFileStackSize()); |
|---|
| 2032 | ret = NXflush(&h); /* modifies and reallocates h */ |
|---|
| 2033 | memcpy(pHandle, h, getFileStackSize()); |
|---|
| 2034 | return ret; |
|---|
| 2035 | } |
|---|
| 2036 | /*----------------------------------------------------------------------*/ |
|---|
| 2037 | NXstatus NXfmakedata(NXhandle fid, char *name, int *pDatatype, |
|---|
| 2038 | int *pRank, int dimensions[]) |
|---|
| 2039 | { |
|---|
| 2040 | NXstatus ret; |
|---|
| 2041 | static char buffer[256]; |
|---|
| 2042 | int i, *reversed_dimensions; |
|---|
| 2043 | reversed_dimensions = (int*)malloc(*pRank * sizeof(int)); |
|---|
| 2044 | if (reversed_dimensions == NULL) |
|---|
| 2045 | { |
|---|
| 2046 | sprintf (buffer, |
|---|
| 2047 | "ERROR: Cannot allocate space for array rank of %d in NXfmakedata", |
|---|
| 2048 | *pRank); |
|---|
| 2049 | NXReportError( buffer); |
|---|
| 2050 | return NX_ERROR; |
|---|
| 2051 | } |
|---|
| 2052 | /* |
|---|
| 2053 | * Reverse dimensions array as FORTRAN is column major, C row major |
|---|
| 2054 | */ |
|---|
| 2055 | for(i=0; i < *pRank; i++) |
|---|
| 2056 | { |
|---|
| 2057 | reversed_dimensions[i] = dimensions[*pRank - i - 1]; |
|---|
| 2058 | } |
|---|
| 2059 | ret = NXmakedata(fid, name, *pDatatype, *pRank, reversed_dimensions); |
|---|
| 2060 | free(reversed_dimensions); |
|---|
| 2061 | return ret; |
|---|
| 2062 | } |
|---|
| 2063 | |
|---|
| 2064 | /*-----------------------------------------------------------------------*/ |
|---|
| 2065 | NXstatus NXfcompmakedata(NXhandle fid, char *name, |
|---|
| 2066 | int *pDatatype, |
|---|
| 2067 | int *pRank, int dimensions[], |
|---|
| 2068 | int *compression_type, int chunk[]) |
|---|
| 2069 | { |
|---|
| 2070 | NXstatus ret; |
|---|
| 2071 | static char buffer[256]; |
|---|
| 2072 | int i, *reversed_dimensions, *reversed_chunk; |
|---|
| 2073 | reversed_dimensions = (int*)malloc(*pRank * sizeof(int)); |
|---|
| 2074 | reversed_chunk = (int*)malloc(*pRank * sizeof(int)); |
|---|
| 2075 | if (reversed_dimensions == NULL || reversed_chunk == NULL) |
|---|
| 2076 | { |
|---|
| 2077 | sprintf (buffer, |
|---|
| 2078 | "ERROR: Cannot allocate space for array rank of %d in NXfcompmakedata", |
|---|
| 2079 | *pRank); |
|---|
| 2080 | NXReportError( buffer); |
|---|
| 2081 | return NX_ERROR; |
|---|
| 2082 | } |
|---|
| 2083 | /* |
|---|
| 2084 | * Reverse dimensions array as FORTRAN is column major, C row major |
|---|
| 2085 | */ |
|---|
| 2086 | for(i=0; i < *pRank; i++) |
|---|
| 2087 | { |
|---|
| 2088 | reversed_dimensions[i] = dimensions[*pRank - i - 1]; |
|---|
| 2089 | reversed_chunk[i] = chunk[*pRank - i - 1]; |
|---|
| 2090 | } |
|---|
| 2091 | ret = NXcompmakedata(fid, name, *pDatatype, *pRank, |
|---|
| 2092 | reversed_dimensions,*compression_type, reversed_chunk); |
|---|
| 2093 | free(reversed_dimensions); |
|---|
| 2094 | free(reversed_chunk); |
|---|
| 2095 | return ret; |
|---|
| 2096 | } |
|---|
| 2097 | /*-----------------------------------------------------------------------*/ |
|---|
| 2098 | NXstatus NXfcompress(NXhandle fid, int *compr_type) |
|---|
| 2099 | { |
|---|
| 2100 | return NXcompress(fid,*compr_type); |
|---|
| 2101 | } |
|---|
| 2102 | /*-----------------------------------------------------------------------*/ |
|---|
| 2103 | NXstatus NXfputattr(NXhandle fid, const char *name, const void *data, |
|---|
| 2104 | int *pDatalen, int *pIType) |
|---|
| 2105 | { |
|---|
| 2106 | return NXputattr(fid, name, data, *pDatalen, *pIType); |
|---|
| 2107 | } |
|---|
| 2108 | |
|---|
| 2109 | |
|---|
| 2110 | /* |
|---|
| 2111 | * implement snprintf when it is not available |
|---|
| 2112 | */ |
|---|
| 2113 | int nxisnprintf(char* buffer, int len, const char* format, ... ) |
|---|
| 2114 | { |
|---|
| 2115 | int ret; |
|---|
| 2116 | va_list valist; |
|---|
| 2117 | va_start(valist,format); |
|---|
| 2118 | ret = vsprintf(buffer, format, valist); |
|---|
| 2119 | va_end(valist); |
|---|
| 2120 | return ret; |
|---|
| 2121 | } |
|---|
| 2122 | |
|---|
| 2123 | /*--------------------------------------------------------------------------*/ |
|---|
| 2124 | NXstatus NXfgetpath(NXhandle fid, char *path, int *pathlen) |
|---|
| 2125 | { |
|---|
| 2126 | return NXgetpath(fid,path,*pathlen); |
|---|
| 2127 | } |
|---|
| 2128 | |
|---|
| 2129 | const char* NXgetversion() |
|---|
| 2130 | { |
|---|
| 2131 | return NEXUS_VERSION ; |
|---|
| 2132 | } |
|---|
| 2133 | |
|---|